5AO0
Crystal structure of human SAMHD1 (amino acid residues 41-583) bound to ddGTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | H 3 2 |
Unit cell lengths | 163.173, 163.173, 260.716 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.423 - 3.731 |
R-factor | 0.2212 |
Rwork | 0.219 |
R-free | 0.26770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3u1n |
RMSD bond length | 0.006 |
RMSD bond angle | 1.056 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.960 |
High resolution limit [Å] | 3.730 | 3.730 |
Rmerge | 0.170 | 0.590 |
Number of reflections | 14005 | |
<I/σ(I)> | 12.23 | 4.37 |
Completeness [%] | 98.7 | 92.5 |
Redundancy | 9.67 | 8.26 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 160 MM SUCCINIC ACID, 11% PEG 3350, PH 7 |