5A2K
Crystal structure of scFv-SM3 in complex with APD-TGalNAc-RP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC CCD |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.418, 68.796, 90.414 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 90.410 - 1.700 |
R-factor | 0.17695 |
Rwork | 0.176 |
R-free | 0.21619 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sm3 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.567 |
Data reduction software | XDS |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | 1.790 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.050 | 0.510 |
Number of reflections | 25092 | |
<I/σ(I)> | 18.9 | 3 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 5.4 | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 |