5YA5
CRYSTAL STRUCTURE OF c-MET IN COMPLEX WITH NOVEL INHIBITOR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-15 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.360, 47.340, 158.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.927 - 1.890 |
R-factor | 0.2121 |
Rwork | 0.211 |
R-free | 0.23490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4gg5 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.095 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.927 | 40.927 | 1.940 |
High resolution limit [Å] | 1.890 | 8.450 | 1.890 |
Rmerge | 0.046 | 0.026 | 0.388 |
Rmeas | 0.053 | 0.031 | 0.453 |
Total number of observations | 187189 | ||
Number of reflections | 49233 | 468 | 3657 |
<I/σ(I)> | 17.33 | 35.51 | 3.49 |
Completeness [%] | 99.7 | 84.9 | 100 |
Redundancy | 3.802 | 3.314 | 3.815 |
CC(1/2) | 0.998 | 0.998 | 0.862 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1M Tris pH7.5, 15% glycerol, 12% MPD, 5% isopropanol, 15% PEG5Kmme |