5VK2
Structural basis for antibody-mediated neutralization of Lassa virus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-07-16 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 0.97969 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 152.697, 152.697, 456.738 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.602 - 3.201 |
| R-factor | 0.1908 |
| Rwork | 0.189 |
| R-free | 0.23130 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5ine |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.615 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.600 | 3.300 |
| High resolution limit [Å] | 3.200 | 3.200 |
| Rpim | 0.845 | |
| Number of reflections | 52823 | 4465 |
| <I/σ(I)> | 16.17 | 1.1 |
| Completeness [%] | 99.7 | 99.5 |
| Redundancy | 12.9 | 12.6 |
| CC(1/2) | 0.999 | 0.574 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 296 | 0.1M Tris pH 8, 15-18% PEG 3350 and 0.1M-0.3M magnesium acetate |






