5U8R
Structure of the ectodomain of the human Type 1 insulin-like growth factor receptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 95.030, 201.730, 117.750 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.359 - 3.000 |
R-factor | 0.257283021028 |
Rwork | 0.256 |
R-free | 0.28530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | domains from 1IGR 4zxb 3umt |
RMSD bond length | 0.002 |
RMSD bond angle | 0.481 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | phenix.refine (1.11.1-2575_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.130 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.250 | 3.470 |
Number of reflections | 45844 | |
<I/σ(I)> | 8.3 | 0.6 |
Completeness [%] | 99.7 | 99.5 |
Redundancy | 8.9 | 7.2 |
CC(1/2) | 0.999 | 0.551 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 1.2 M ammonium sulfate, 0.1 M imidazole-malate pH 7.0 |