5N48
Structure of Anticalin N9B in complex with extra-domain B of human oncofetal fibronectin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.2 |
| Synchrotron site | BESSY |
| Beamline | 14.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-12-07 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.91741 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 52.456, 67.801, 76.806 |
| Unit cell angles | 90.00, 90.06, 90.00 |
Refinement procedure
| Resolution | 28.470 - 1.600 |
| R-factor | 0.1707 |
| Rwork | 0.169 |
| R-free | 0.20780 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4gh7 |
| RMSD bond length | 0.019 |
| RMSD bond angle | 1.918 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.470 | 28.470 | 1.700 |
| High resolution limit [Å] | 1.600 | 10.000 | 1.600 |
| Rmerge | 0.057 | 0.032 | 0.423 |
| Rmeas | 0.065 | 0.037 | 0.485 |
| Total number of observations | 296035 | ||
| Number of reflections | 70827 | 302 | 11714 |
| <I/σ(I)> | 14.85 | 31.99 | 3.33 |
| Completeness [%] | 99.7 | 93.2 | 99.8 |
| Redundancy | 4.18 | 3.894 | 4.172 |
| CC(1/2) | 0.998 | 0.998 | 0.879 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 29 % (w/v) PEG4000, 0.1 M Na-malonate |






