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5MH5

D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with 2-keto-hexanoic acid and NADP+ (1.4 A resolution)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyCCD
Collection date2009-12-06
DetectorADSC QUANTUM 315
Wavelength(s)0.9507
Spacegroup nameP 1 21 1
Unit cell lengths62.530, 87.400, 66.100
Unit cell angles90.00, 96.34, 90.00
Refinement procedure
Resolution52.510 - 1.400
R-factor0.13746
Rwork0.136
R-free0.16701
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5mh6
RMSD bond length0.010
RMSD bond angle1.588
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.5101.420
High resolution limit [Å]1.4001.400
Rmerge0.0360.377
Number of reflections132820
<I/σ(I)>15.42.4
Completeness [%]95.591.5
Redundancy7.78
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8290Protein buffer: 20 mM Tris-HCl pH8, 3 mM EDTA and 1 M NaCl Crystallisation condition: 0.1 M Tris-HCl pH8, 0.5 M magnesium acetate and 18 % PEG3350 Ligands: 5 mM NADP+ and 50 mM 2-keto-hexanoic acid

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