5LPM
Crystal structure of the bromodomain of human Ep300 bound to the inhibitor XDM3d
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.861, 81.087, 44.779 |
Unit cell angles | 90.00, 110.58, 90.00 |
Refinement procedure
Resolution | 41.922 - 1.500 |
R-factor | 0.1593 |
Rwork | 0.158 |
R-free | 0.18710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | apo-p300 |
Data scaling software | Aimless (0.5.17) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.922 | 41.920 | 1.390 |
High resolution limit [Å] | 1.370 | 7.490 | 1.370 |
Rmerge | 0.038 | 0.027 | 0.732 |
Number of reflections | 52009 | ||
<I/σ(I)> | 16.8 | ||
Completeness [%] | 97.3 | 94.6 | 79.6 |
Redundancy | 4.4 | 4.3 | 3.7 |
CC(1/2) | 0.999 | 0.996 | 0.672 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.5 | 277 | NaCl, PEG 3350 |