5CBR
Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with the antagonist (S)-2-amino-3-(3,4-dichloro-5-(5-hydroxypyridin-3-yl)phenyl)propanoic acid at 2.0A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-07-18 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.8726 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 60.130, 95.780, 49.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.180 - 1.996 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.23830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1n0t |
RMSD bond length | 0.007 |
RMSD bond angle | 1.054 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.9) |
Phasing software | PHASER (2.1.4) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 95.759 | 38.180 | 2.100 |
High resolution limit [Å] | 1.996 | 6.310 | 1.990 |
Rmerge | 0.040 | 0.336 | |
Rmeas | 0.098 | ||
Rpim | 0.053 | 0.027 | 0.219 |
Total number of observations | 64202 | 2063 | 8935 |
Number of reflections | 19935 | ||
<I/σ(I)> | 10.5 | 30.2 | 3.3 |
Completeness [%] | 99.3 | 97.8 | 97.7 |
Redundancy | 3.2 | 2.9 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 280 | PEG4000, lithium sulfate and phosphate-citrate buffer pH 4.5 |