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5CBR

Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with the antagonist (S)-2-amino-3-(3,4-dichloro-5-(5-hydroxypyridin-3-yl)phenyl)propanoic acid at 2.0A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue 4ZK A 301
ChainResidue
ATYR58
ATYR187
ALEU188
ALEU189
AGLU190
AMET193
ATYR217
AHOH417
APRO86
ALEU87
ATHR88
AARG93
ALEU135
ASER139
ATHR140
ATHR171

site_idAC2
Number of Residues8
Detailsbinding site for residue GOL A 302
ChainResidue
AILE89
APRO102
APRO102
ALYS215
AGLY216
ALEU236
AASN239
AHOH470

site_idAC3
Number of Residues8
Detailsbinding site for residue GOL A 303
ChainResidue
ALYS57
ATYR58
AGLY59
AALA60
AASN69
AARG93
ASO4309
AHOH417

site_idAC4
Number of Residues6
Detailsbinding site for residue GOL A 304
ChainResidue
AGLU10
ATYR58
ALEU135
ATHR170
ATHR171
AHOH478

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 305
ChainResidue
AHIS20
ALYS141
AARG145
AARG160
AHOH403

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 306
ChainResidue
ALYS79
ALYS113
ASO4308
AHOH413

site_idAC7
Number of Residues4
Detailsbinding site for residue SO4 A 307
ChainResidue
ALYS148
AARG169
AGLN241
AHOH409

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 A 308
ChainResidue
AILE67
ALYS113
ALYS182
ASO4306

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 A 309
ChainResidue
ALYS57
ASER137
AGLY138
AGOL303
AHOH414

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 A 310
ChainResidue
AILE149
AALA150
ALYS246
AHOH490

site_idAD2
Number of Residues4
Detailsbinding site for residue ACT A 311
ChainResidue
ALYS114
AGLU198
AMET206
AHOH449

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO86
ATHR88
AARG93
ASER139
ATHR140
AGLU190

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG61
AARG145
ALYS237

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE118

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER147

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER181

site_idSWS_FT_FI6
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN0

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PDB entries from 2024-09-04

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