Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5BO9

Structure of human sialyltransferase ST8SiaIII in complex with CMP-3FNeu5Ac and Sia-6S-LacNAc

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2015-02-21
DetectorADSC QUANTUM 315r
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths63.350, 94.874, 126.459
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution75.890 - 2.300
R-factor0.1871
Rwork0.185
R-free0.23040
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5bo8
RMSD bond length0.015
RMSD bond angle1.872
Data reduction softwareXDS
Data scaling softwareAimless (0.5.4)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]75.89075.8902.380
High resolution limit [Å]2.3008.9102.300
Rmerge0.0870.0250.686
Rpim0.0440.0130.347
Total number of observations166324293716501
Number of reflections34645
<I/σ(I)>12.333.52.2
Completeness [%]100.099.9100
Redundancy4.84.24.9
CC(1/2)0.9980.9990.674
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.529318-21% PEG3350, 30 mM sodium tartrate, 100 mM sodium citrate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon