4Z2B
The structure of human PDE12 residues 161-609 in complex with GSK3036342A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-09-12 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.309, 66.532, 124.880 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.300 - 1.800 |
R-factor | 0.1827 |
Rwork | 0.181 |
R-free | 0.21810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ng0 |
RMSD bond length | 0.010 |
RMSD bond angle | 0.980 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.5.1) |
Refinement software | BUSTER (2.11.6) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 4.882 | 1.800 |
Rmerge | 0.054 | 0.053 | 0.266 |
Rmeas | 0.058 | 0.332 | |
Rpim | 0.023 | 0.195 | |
Number of reflections | 40745 | ||
<I/σ(I)> | 15.2 | ||
Completeness [%] | 91.9 | 98.2 | 66.1 |
Redundancy | 4.8 | 6.3 | 2.1 |
CC(1/2) | 0.997 | 0.904 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295 | 0.1M Tris Ph 8.5 15% Peg20000 25% Ethylene Glycol |