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4XBF

Structure of LSD1:CoREST in complex with ssRNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2014-07-13
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameI 2 2 2
Unit cell lengths121.073, 178.411, 234.676
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.018 - 2.803
R-factor0.202
Rwork0.201
R-free0.22680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2iw5
RMSD bond length0.003
RMSD bond angle0.743
Data reduction softwareHKL-2000 (Version v706)
Refinement softwarePHENIX ((phenix.refine: dev_1839))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.0182.873
High resolution limit [Å]2.8032.803
Number of reflections62270
<I/σ(I)>23.8
Completeness [%]99.596.8
Redundancy14.612.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.6290The LSD1-CoREST complex 10-12 mg/ml concentration (in 25 mM HEPES-Na, pH 7.4, 100 mM NaCl, 5 mM DTT, 1 mM PMSF) was mixed (1:1) with the reservoir solution [0.60 M Li2SO4, 0.63 M (NH4)2SO4, 0.25 M NaCl, 100 mM Na-citrate, pH 5.6, 10 mM DTT]

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