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4QFD

Co-crystal structure of compound 2 (3-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)propanoic acid) and FAD bound to human DAAO at 2.85A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyCCD
Collection date2013-02-18
DetectorADSC QUANTUM 315r
Wavelength(s)1.12709
Spacegroup nameP 32 2 1
Unit cell lengths86.490, 86.490, 187.970
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.910 - 2.850
R-factor0.25
Rwork0.248
R-free0.28700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3cuk
RMSD bond length0.006
RMSD bond angle1.104
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.5.2)
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.920
High resolution limit [Å]2.8502.850
Rmerge0.0690.728
Number of reflections19576186
<I/σ(I)>21.763.2
Completeness [%]99.199.8
Redundancy6.67.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.4289DAAO AT 2 MG/ML IN 50 MM SODIUM PHOSPHATE PH 6.6, 10 UM FAD INCUBATED WITH 5-FOLD EXCESS OF SEP-0374036 OVERNIGHT AT 277 K, CRYSTALLIZED AGAINST 13.6% PEG3350, 0.1 M TRIS PH 7.4, 150 MM POTASSIUM CITRATE TRIBASIC AND 20 MM GLYCEROL AS CRYO-PROTECTANT, CRYSTAL TRACKING ID 241709B5, UNIQUE PUCK ID XSS6-4, VAPOR DIFFUSION, SITTING DROP, temperature 289K

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