4NGD
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having 5'-p and UU-3' ends (1.95 Angstrom resolution)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-06-16 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97918 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 108.710, 84.621, 51.364 |
| Unit cell angles | 90.00, 113.33, 90.00 |
Refinement procedure
| Resolution | 34.144 - 1.958 |
| R-factor | 0.1785 |
| Rwork | 0.177 |
| R-free | 0.20420 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4nha |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.960 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
| High resolution limit [Å] | 1.950 | 4.200 | 1.950 |
| Rmerge | 0.071 | 0.051 | 0.284 |
| Number of reflections | 28748 | ||
| <I/σ(I)> | 10.2 | ||
| Completeness [%] | 93.9 | 99.8 | 70.2 |
| Redundancy | 8.8 | 10.1 | 4.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.2 M lithium sulfate, 0.1 M HEPES, pH 7.0-7.5, 16% PEG3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K |






