4MLR
dihydrodipicolinate synthase from C. jejuni, Y110F mutation with pyruvate and Lysine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-12 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.9796 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 90.983, 97.610, 131.398 |
Unit cell angles | 90.00, 92.06, 90.00 |
Refinement procedure
Resolution | 43.446 - 2.200 |
R-factor | 0.2172 |
Rwork | 0.214 |
R-free | 0.26890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ly8 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.860 |
Data reduction software | d*TREK (9.9.9.7L) |
Data scaling software | d*TREK (9.9.9.7L) |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_1356) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.450 | 43.450 | 2.280 |
High resolution limit [Å] | 2.200 | 4.740 | 2.200 |
Rmerge | 0.147 | 0.076 | 0.784 |
Total number of observations | 49283 | 49430 | |
Number of reflections | 116487 | ||
<I/σ(I)> | 4.5 | 13.3 | 1.4 |
Completeness [%] | 99.9 | 99.6 | 100 |
Redundancy | 4.17 | 4.07 | 4.24 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOUR DIFFUSION, HANGING DROP | 8.5 | 288 | 17% PEG4000, 0.2 M sodium acetate, 0.1 mM TRIS, pH 8.5, VAPOUR DIFFUSION, HANGING DROP, temperature 288K |