4EJD
HIV Protease (PR) dimer in closed form with pepstatin in active site and fragment 1F1 in the outside/top of flap
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 28.820, 65.630, 92.930 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.960 - 1.103 |
R-factor | 0.1475 |
Rwork | 0.146 |
R-free | 0.17620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.442 |
Data reduction software | MOSFLM (3.3.16) |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 92.930 | 21.901 | 1.160 |
High resolution limit [Å] | 1.103 | 3.490 | 1.103 |
Rmerge | 0.052 | 0.483 | |
Total number of observations | 4093 | 34370 | |
Number of reflections | 70609 | ||
<I/σ(I)> | 8.3 | 10.8 | 1.5 |
Completeness [%] | 98.3 | 57.9 | 99.9 |
Redundancy | 3.4 | 2.8 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 298 | 0.2 M potassium bromide, 0.2 M potassium thiocyanate, 3% PGA-LM, 3% MPD, 10% DMSO, 0.1 M sodium cacodylate, pH 6.5, VAPOR DIFFUSION, temperature 298K |