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4EBD

Conformationally Restrained North-methanocarba-2'-deoxyadenosine Corrects the Error-Prone Nature of Human DNA Polymerase Iota

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]110
Detector technologyCCD
Collection date2011-12-09
DetectorADSC QUANTUM 315
Wavelength(s)0.979
Spacegroup nameP 65 2 2
Unit cell lengths97.776, 97.776, 202.739
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.888 - 2.571
R-factor0.212
Rwork0.206
R-free0.26290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3gv5
RMSD bond length0.017
RMSD bond angle1.370
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.6762.640
High resolution limit [Å]2.5702.570
Rmerge0.0270.409
Number of reflections18978
<I/σ(I)>51.55.3
Completeness [%]96.992.3
Redundancy6.45.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.927720 mM Tris-HCl, pH 7.9, 5% glycerol, 10 mM 2-mercaptoethanol, 150 mM calcium chloride, 12% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 277K

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