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4DF8

Crystal structure of the large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with aminopentinyl-7-deaza-2-dATP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Detector technologyCCD
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.23000
Spacegroup nameP 31 2 1
Unit cell lengths108.609, 108.609, 90.516
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.029 - 2.000
R-factor0.1966
Rwork0.195
R-free0.23390
Structure solution methodDifference Fourier Techniques
Starting model (for MR)3m8s
RMSD bond length0.014
RMSD bond angle0.993
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX (1.7.3_928)
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.0302.120
High resolution limit [Å]2.0002.000
<I/σ(I)>14.431.78
Completeness [%]99.999.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829118% PEG 8000, 200mM Mg-Formate, 100 mMTris pH 8.0 , VAPOR DIFFUSION, HANGING DROP, temperature 291K

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