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4C2B

Crystal Structure of High-Affinity von Willebrand Factor A1 domain with Disulfide Mutation in Complex with High Affinity GPIb alpha

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]93
Detector technologyCCD
Collection date2013-04-05
DetectorMARRESEARCH MX-300
Spacegroup nameP 1 21 1
Unit cell lengths96.530, 103.840, 119.930
Unit cell angles90.00, 90.05, 90.00
Refinement procedure
Resolution48.265 - 2.800
R-factor0.2566
Rwork0.253
R-free0.28590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4c2a
RMSD bond length0.002
RMSD bond angle0.465
Data reduction softwareXDS
Data scaling softwareSCALEPACK
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.3002.870
High resolution limit [Å]2.8002.800
Rmerge0.590
Number of reflections56526
<I/σ(I)>2.560.3
Completeness [%]96.680.9
Redundancy2.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
14.6CRYSTALS OF A1/SS-GPIB/VWD2 COMPLEX APPEARED IN DROPS WITH 20% PEG 4000, 0.16 M AMMONIUM SULFATE, 0.08M SODIUM ACETATE, PH 4.6, AND 20% GLYCEROL. THESE CRYSTALS WERE CRUSHED AND USED FOR SEEDING CRYSTAL GROWTH IN 8 MG/ML COMPLEX, 15% PEG 4000, 0.16 M AMMONIUM SULFATE, 0.08 M SODIUM ACETATE, PH 4.6, AND 20% GLYCEROL. SINCE THESE CRYSTALS WERE FORMED IN BUFFER CONTAINING 20% GLYCEROL, NO ADDITIONAL CRYOPROTECTION WAS USED.

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