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4C2A

Crystal Structure of High-Affinity von Willebrand Factor A1 domain with R1306Q and I1309V Mutations in Complex with High Affinity GPIb alpha

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-BM-B
Synchrotron siteAPS
Beamline23-BM-B
Temperature [K]93
Detector technologyCCD
Collection date2012-10-26
DetectorMARRESEARCH
Spacegroup nameP 61
Unit cell lengths89.060, 89.060, 124.520
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.446 - 2.081
R-factor0.162
Rwork0.161
R-free0.18900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1sq0
RMSD bond length0.003
RMSD bond angle0.688
Data reduction softwareMOSFLM
Data scaling softwareSCALEPACK
Refinement softwarePHENIX ((PHENIX.REFINE: 1.8.2_1309))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4002.190
High resolution limit [Å]2.0802.080
Rmerge0.0900.740
Number of reflections66245
<I/σ(I)>8.91.7
Completeness [%]99.999.5
Redundancy2.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.5CRYSTALS OF A1/VWD2-GPIBALPA/VWD2 COMPLEX APPEARED IN 12% PEG 8000, 0.1 M SODIUM CACODYLATE PH 6.5, 0.1 M CALCIUM ACETATE, AND 0.4 MG/ML RISTOCETIN (SIGMA-ALDRICH). THESE CRYSTALS WERE CRUSHED AND USED FOR SEEDING. CRYSTALS GREW IN 10 MG/ML COMPLEX, 14% PEG8000, 0.2 M CALCIUM ACETATE, 0.1 M SODIUM CACODYLATE, PH 6.5, AND 0.4 MG/ML RISTOCETIN. NEXT WE SOAKED THESE CRYSTALS IN 14% PEG8000, 0.2 M CALCIUM ACETATE, 0.1 SODIUM CACODYLATE, PH 6.5, AND 4 MG/ML RISTOCETIN.

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