Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VJE

Crystal structure of the Y248A mutant of C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus in complex with zaragozic acid A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL44XU
Synchrotron siteSPring-8
BeamlineBL44XU
Temperature [K]100
Detector technologyCCD
Collection date2010-07-05
DetectorRAYONIX MX225HE
Wavelength(s)0.90000
Spacegroup nameP 31 2 1
Unit cell lengths80.177, 80.177, 185.414
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution28.300 - 2.120
R-factor0.20764
Rwork0.205
R-free0.25401
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2zco
RMSD bond length0.007
RMSD bond angle1.396
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.200
High resolution limit [Å]2.1202.120
Rmerge0.0710.485
Number of reflections39844
<I/σ(I)>33.64.8
Completeness [%]99.599.9
Redundancy99
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529811-21% PEG 4000, 0.3-0.4M MgCl2, 0.1M Tris pH 8.5, 0.25mM zaragozic acid A, VAPOR DIFFUSION, HANGING DROP, temperature 298K

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon