3VJE
Crystal structure of the Y248A mutant of C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus in complex with zaragozic acid A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-05 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.90000 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 80.177, 80.177, 185.414 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.300 - 2.120 |
R-factor | 0.20764 |
Rwork | 0.205 |
R-free | 0.25401 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zco |
RMSD bond length | 0.007 |
RMSD bond angle | 1.396 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.200 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmerge | 0.071 | 0.485 |
Number of reflections | 39844 | |
<I/σ(I)> | 33.6 | 4.8 |
Completeness [%] | 99.5 | 99.9 |
Redundancy | 9 | 9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 11-21% PEG 4000, 0.3-0.4M MgCl2, 0.1M Tris pH 8.5, 0.25mM zaragozic acid A, VAPOR DIFFUSION, HANGING DROP, temperature 298K |