3U5K
Crystal Structure of the first bromodomain of human BRD4 in complex with Midazolam
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2010-09-25 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.52 |
Spacegroup name | P 31 |
Unit cell lengths | 89.550, 89.550, 64.411 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.680 - 1.800 |
R-factor | 0.2116 |
Rwork | 0.210 |
R-free | 0.25990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oss |
RMSD bond length | 0.016 |
RMSD bond angle | 1.640 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 26.680 | 26.145 | 1.900 |
High resolution limit [Å] | 1.800 | 5.690 | 1.800 |
Rmerge | 0.102 | 0.071 | 0.522 |
Total number of observations | 8414 | 21952 | |
Number of reflections | 51230 | ||
<I/σ(I)> | 7.8 | 7.8 | 1.5 |
Completeness [%] | 95.7 | 98.7 | 83.9 |
Redundancy | 4.1 | 5 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277 | 0.1M MES pH 5.5, 0.1M MgCl, 15% PEG 6000, 10% EtGly, VAPOR DIFFUSION, SITTING DROP, temperature 277K |