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3MG0

Structure of yeast 20S proteasome with bortezomib

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Detector technologyCCD
DetectorMAR CCD 165 mm
Wavelength(s)0.97947
Spacegroup nameP 1 21 1
Unit cell lengths136.124, 300.532, 145.834
Unit cell angles90.00, 113.16, 90.00
Refinement procedure
Resolution50.000 - 2.680
R-factor0.227
Rwork0.226
R-free0.25300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2f16
RMSD bond length0.008
RMSD bond angle1.105
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]150.76050.0002.800
High resolution limit [Å]2.6805.8102.680
Rmerge0.0980.0360.328
Number of reflections276539
<I/σ(I)>9.7
Completeness [%]92.999.171.6
Redundancy3.73.82.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293100 mM MES, 40 mM MgOAc, 15% 2-methyl-2,4-pentanediol (MPD), 10 mM EDTA, pH 7.0, vapor diffusion, hanging drop, temperature 293K

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PDB entries from 2024-09-18

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