2X2K
Crystal Structure of phosphorylated RET tyrosine kinase domain with inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2007-07-29 |
Detector | MARRESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 71.600, 70.912, 78.871 |
Unit cell angles | 90.00, 101.68, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.600 |
R-factor | 0.194 |
Rwork | 0.191 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ivt FLEXIBLE LOOPS REMOVED |
RMSD bond length | 0.016 |
RMSD bond angle | 1.632 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 21.640 | 2.740 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.060 | 0.230 |
Number of reflections | 11886 | |
<I/σ(I)> | 17 | 5.2 |
Completeness [%] | 99.1 | 100 |
Redundancy | 3.1 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | PROTEIN 4.5 MG/ML IN 20 MM TRIS-HCL PH 8, 100MM NACL,1MM DTT, 1MM EDTA RESERVOIR 1.85 M SODIUM FORMATE, 0.1 SODIUM CITRATE PH 5.5, 0.2M LITHIUM CHLORIDE VAPOUR DIFFUSION, SITTING DROP, 289 K |