2PE4
Structure of Human Hyaluronidase 1, a Hyaluronan Hydrolyzing Enzyme Involved in Tumor Growth and Angiogenesis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-04-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 92.050, 92.050, 143.810 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.650 - 2.000 |
R-factor | 0.19 |
Rwork | 0.190 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fcu |
RMSD bond length | 0.013 |
RMSD bond angle | 1.823 |
Data reduction software | d*TREK |
Data scaling software | d*TREK (8.0SSI) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.650 | 30.650 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.063 | 0.044 | 0.488 |
Total number of observations | 56516 | 40866 | |
Number of reflections | 47955 | ||
<I/σ(I)> | 14 | 33.4 | 3.4 |
Completeness [%] | 99.4 | 99.6 | 97.7 |
Redundancy | 10.48 | 10.95 | 8.72 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 298 | 1.5 M sodium chloride, 10% ethanol, 3% galactose, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |