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NMR 拘束データを含む全ての PDB エントリー
8BOO
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BU of 8boo by Molmil
Spatials structure of amyloidogenic SEM1(45-67) peptide
分子名称: Semenogelin-1
著者Blokhin, D.S, Osetrina, D.A.
登録日2022-11-15
公開日2023-01-18
最終更新日2024-01-31
実験手法SOLUTION NMR
主引用文献Spatials structure of amyloidogenic SEM1(45-67) peptide
To Be Published
8BQY
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BU of 8bqy by Molmil
An i-motif domain able to undergo pH-dependent conformational transitions (acidic structure)
分子名称: DNA (5'-D(*CP*(DNR)P*GP*TP*TP*(DNR)P*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*(DNR)P*CP*GP*T)-3')
著者Serrano-Chacon, I, Mir, B, Cupellini, L, Colizzi, F, Orozco, M, Escaja, N, Gonzalez, C.
登録日2022-11-22
公開日2023-02-22
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs.
J.Am.Chem.Soc., 145, 2023
8BSS
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Solution Structure of thanatin-like derivative 5 in complex with E. coli LptA mutant Q62L
分子名称: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
著者Oi, K.K, Jurt, S, Moehle, K, Zerbe, O.
登録日2022-11-26
公開日2023-06-07
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae.
Sci Adv, 9, 2023
8BV6
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An i-motif domain able to undergo pH-dependent conformational transitions (neutral structure)
分子名称: DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3')
著者Serrano-Chacon, I, Mir, B, Cupellini, L, Colizzi, F, Orozco, M, Escaja, N, Gonzalez, C.
登録日2022-12-01
公開日2023-02-22
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs.
J.Am.Chem.Soc., 145, 2023
8BVC
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BU of 8bvc by Molmil
Solution structure of Metridium senile toxin Ms13-1 with the unique fold
分子名称: Ms13-1
著者Mineev, K.S, Arseniev, A.S, Andreev, Y.A, Osmakov, D.I, Khasanov, T.A.
登録日2022-12-06
公開日2023-12-20
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Solution structure of Metridium senile toxin Ms13-1 with the unique fold
To Be Published
8BVZ
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Spatial structure of amyloidogenic SEM1(49-67) peptide
分子名称: Alpha-inhibin-31
著者Semenova, E.A, Yulmetov, A.R, Osetrina, D.A, Blokhin, D.S.
登録日2022-12-06
公開日2023-01-18
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Spatial structure of amyloidogenic SEM1(49-67) peptide
To Be Published
8BWB
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Spider toxin Pha1b (PnTx3-6) from Phoneutria nigriventer targeting CaV2.x calcium channels and TRPA1 channel
分子名称: Omega-ctenitoxin-Pn4a
著者Mironov, P.A, Chernaya, E.M, Paramonov, A.S, Shenkarev, Z.O.
登録日2022-12-06
公開日2023-06-21
最終更新日2023-07-05
実験手法SOLUTION NMR
主引用文献Recombinant Production, NMR Solution Structure, and Membrane Interaction of the Ph alpha 1 beta Toxin, a TRPA1 Modulator from the Brazilian Armed Spider Phoneutria nigriventer .
Toxins, 15, 2023
8BWT
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BU of 8bwt by Molmil
Structure of a symmetrical internal loop motif with three consecutive U:U mismatches from stem-loop 1 in the 3'-UTR of the SARS-CoV2 genomic RNA
分子名称: RNA (26-MER)
著者Voegele, J, Duchardt-Ferner, E, Schwalbe, H, Woehnert, J.
登録日2022-12-07
公開日2023-08-30
最終更新日2024-07-03
実験手法SOLUTION NMR
主引用文献Structure of an internal loop motif with three consecutive U•U mismatches from stem-loop 1 in the 3'-UTR of the SARS-CoV-2 genomic RNA.
Nucleic Acids Res., 52, 2024
8BWW
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Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs
分子名称: Thrombin light chain
著者Diehl, C.
登録日2022-12-07
公開日2023-09-06
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs.
Nat Commun, 14, 2023
8BXJ
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apo structure of the specific silver chaperone needed for bacterial silver resistance
分子名称: Copper ABC transporter substrate-binding protein
著者Monneau, Y.R, Walker, O, Hologne, M.
登録日2022-12-08
公開日2023-10-25
実験手法SOLUTION NMR
主引用文献The battle for silver binding: How the interplay between the SilE, SilF, and SilB proteins contributes to the silver efflux pump mechanism.
J.Biol.Chem., 299, 2023
8BZU
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BU of 8bzu by Molmil
Double-ion dependent DNA quadruplex structure formed by C.elegans telomeric sequence
分子名称: DNA (5'-D(*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*C)-3')
著者Lenarcic Zivkovic, M, Trantirek, L.
登録日2022-12-15
公開日2024-03-13
実験手法SOLUTION NMR
主引用文献DNA Quadruplex Structure with a Unique Cation Dependency.
Angew.Chem.Int.Ed.Engl., 63, 2024
8C18
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Solution structure of carotenoid-binding protein AstaPo1 in complex with astaxanthin
分子名称: ASTAXANTHIN, Astaxanthin binding fasciclin family protein
著者Kornilov, F.D, Savitskaya, A.G, Slonimskiy, Y.B, Goncharuk, S.A, Sluchanko, N.N, Mineev, K.S.
登録日2022-12-20
公開日2023-04-05
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP.
Commun Biol, 6, 2023
8C2Q
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Silver ion-bound structure of the silver specific chaperone SilF needed for bacterial silver resistance
分子名称: Copper ABC transporter substrate-binding protein, SILVER ION
著者Monneau, Y.R, Walker, O, Hologne, M.
登録日2022-12-22
公開日2023-10-25
実験手法SOLUTION NMR
主引用文献The battle for silver binding: How the interplay between the SilE, SilF, and SilB proteins contributes to the silver efflux pump mechanism.
J.Biol.Chem., 299, 2023
8C5J
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BU of 8c5j by Molmil
Spatial structure of Lch-alpha peptide from two-component lantibiotic system Lichenicidin VK21
分子名称: Lantibiotic lichenicidin VK21 A1
著者Mineev, K.S, Paramonov, A.S, Arseniev, A.S, Ovchinnikova, T.V, Shenkarev, Z.O.
登録日2023-01-09
公開日2023-03-22
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Specific Binding of the alpha-Component of the Lantibiotic Lichenicidin to the Peptidoglycan Precursor Lipid II Predetermines Its Antimicrobial Activity.
Int J Mol Sci, 24, 2023
8C7A
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BU of 8c7a by Molmil
Slow cation movements within tetramolecular G-quadruplex: vacant cation binding sites in addition to all syn G-quartet
分子名称: DNA (5'-D(*GP*GP*GP*GP*CP*C)-3')
著者Wang, B, Zalar, M, Plavec, J, Sket, P.
登録日2023-01-14
公開日2023-11-22
実験手法SOLUTION NMR
主引用文献Insight into Tetramolecular DNA G-Quadruplexes Associated with ALS and FTLD: Cation Interactions and Formation of Higher-Ordered Structure.
Int J Mol Sci, 24, 2023
8C7B
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Slow cation movements within tetramolecular G-quadruplex: vacant cation binding sites in addition to all syn G-quartet
分子名称: DNA (5'-D(*GP*GP*GP*GP*CP*C)-3')
著者Wang, B, Zalar, M, Plavec, J, Sket, P.
登録日2023-01-14
公開日2023-11-22
実験手法SOLUTION NMR
主引用文献Insight into Tetramolecular DNA G-Quadruplexes Associated with ALS and FTLD: Cation Interactions and Formation of Higher-Ordered Structure.
Int J Mol Sci, 24, 2023
8C7K
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YdaS from E. coli O157:H7 cryptic prophage CP-933P
分子名称: Phage antirepressor protein Cro
著者Prolic-Kalinsek, M, Volkov, A.N, Loris, R.
登録日2023-01-16
公開日2023-01-25
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7.
Acta Crystallogr D Struct Biol, 79, 2023
8C8A
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The NMR structure of the MAX28 effector from Magnaporthe oryzae
分子名称: But2 domain-containing protein
著者Lahfa, M, Padilla, A, de Guillen, K, Kroj, T, Roumestand, C, Barthe, P.
登録日2023-01-19
公開日2024-02-14
最終更新日2024-09-04
実験手法SOLUTION NMR
主引用文献The structural landscape and diversity of Pyricularia oryzae MAX effectors revisited.
Plos Pathog., 20, 2024
8CA0
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BU of 8ca0 by Molmil
Macrophage inhibitory factor (MIF) in complex with small molecule PAV174
分子名称: 1-ethyl-9-methyl-3,7-dipyrrolidin-1-yl-phenothiazine, Macrophage migration inhibitory factor
著者Mueller, A, Torres, F, Roland, R, Korth, C.
登録日2023-01-24
公開日2024-02-07
実験手法SOLUTION NMR
主引用文献Oxidized MIF is a drug target at the molecular intersection between immune activation and tau cellular pathology
To Be Published
8CF2
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BU of 8cf2 by Molmil
Solution structure of the RNA helix formed by the 5'-end of U1 snRNA and an A-1 bulged 5'-splice site in complex with SMN-CY
分子名称: 4-[(3~{S})-3-ethylpiperazin-1-yl]-2-fluoranyl-~{N}-(2-methylimidazo[1,2-a]pyrazin-6-yl)benzamide, RNA (5'-R(P*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3')
著者Malard, F, Marquevielle, J, Campagne, S.
登録日2023-02-02
公開日2024-02-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design.
Nucleic Acids Res., 52, 2024
8CF4
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SH3 domain solved by the exact solid-state method from the Bruker Dynamics Center using the combined correction method with PDB 2NUZ
分子名称: Spectrin alpha chain, non-erythrocytic 1
著者Soeldner, B.
登録日2023-02-02
公開日2023-03-08
最終更新日2024-06-19
実験手法SOLID-STATE NMR
主引用文献Integrated Assessment of the Structure and Dynamics of Solid Proteins.
J Phys Chem Lett, 14, 2023
8CGF
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Interleukin-4 (wild type) pH 2.4
分子名称: Interleukin-4
著者Vaz, D.C, Rodrigues, J.R, Loureiro-Ferreira, N, Mueller, T, Sebald, W, Redfield, C, Brito, R.M.M.
登録日2023-02-04
公開日2023-10-18
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Lessons on protein structure from interleukin-4: All disulfides are not created equal.
Proteins, 92, 2024
8CH7
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RDC-refined Interleukin-4 (wild type) pH 5.6
分子名称: Interleukin-4
著者Vaz, D.C, Rodrigues, J.R, Loureiro-Ferreira, N, Mueller, T, Sebald, W, Redfield, C, Brito, R.M.M.
登録日2023-02-07
公開日2023-10-18
最終更新日2024-11-13
実験手法SOLUTION NMR
主引用文献Lessons on protein structure from interleukin-4: All disulfides are not created equal.
Proteins, 92, 2024
8CHG
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SH3 domain solved by the exact solid-state method from the Bruker Dynamics Center using the correction for dipolar truncation with PDB 2NUZ
分子名称: Spectrin alpha chain, non-erythrocytic 1
著者Soeldner, B.
登録日2023-02-08
公開日2023-03-08
最終更新日2024-06-19
実験手法SOLID-STATE NMR
主引用文献Integrated Assessment of the Structure and Dynamics of Solid Proteins.
J Phys Chem Lett, 14, 2023
8CHH
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SH3 domain solved by the exact solid-state method from the Bruker Dynamics Center using the correction method for spin-diffusion with PDB 2NUZ as reference
分子名称: Spectrin alpha chain, non-erythrocytic 1
著者Soeldner, B.
登録日2023-02-08
公開日2023-03-08
最終更新日2024-06-19
実験手法SOLID-STATE NMR
主引用文献Integrated Assessment of the Structure and Dynamics of Solid Proteins.
J Phys Chem Lett, 14, 2023

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件を2024-11-13に公開中

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