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NMR 拘束データを含む全ての PDB エントリー
7E4E
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NMR solution structures of DNA minidumbbell containing a N1-methyladenine
分子名称: DNA (5'-D(*TP*TP*TP*(MA7)P*TP*TP*TP*A)-3'), SODIUM ION
著者Wan, L, Guo, P, Lam, S.L.
登録日2021-02-11
公開日2021-04-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Effects of Adenine Methylation on the Structure and Thermodynamic Stability of a DNA Minidumbbell.
Int J Mol Sci, 22, 2021
7E5P
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BU of 7e5p by Molmil
Aptamer enhancing peroxidase activity of myoglobin
分子名称: DNA (5'-D(*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*AP*GP*GP*G)-3')
著者Tsukakoshi, K, Matsugami, A, Khunathai, K, Kanazashi, M, Yamagishi, Y, Nakama, K, Oshikawa, D, Hayashi, F, Kuno, H, Ikebukuro, K.
登録日2021-02-19
公開日2021-06-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献G-quadruplex-forming aptamer enhances the peroxidase activity of myoglobin against luminol.
Nucleic Acids Res., 49, 2021
7EAU
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SIB1, an effector of Colletotrichum orbiculare
分子名称: SIN1
著者Mori, M, Ohki, S, Kurita, J.
登録日2021-03-08
公開日2021-11-03
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Fungal effector SIB1 of Colletotrichum orbiculare has unique structural features and can suppress plant immunity in Nicotiana benthamiana.
J.Biol.Chem., 297, 2021
7EB1
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Solution NMR structure of the RRM domain of RNA binding protein RBM3 from homo sapiens
分子名称: RNA-binding protein 3
著者Boral, S, Roy, S, Basak, A.J, Maiti, S, Lee, W, De, S.
登録日2021-03-08
公開日2021-12-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and dynamic studies of the human RNA binding protein RBM3 reveals the molecular basis of its oligomerization and RNA recognition.
Febs J., 289, 2022
7EDK
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BU of 7edk by Molmil
NMR solution structure of Bt14.12, a novel A-family conotoxin from Conus betulinus
分子名称: Conotoxin Bt14.16
著者Zhang, H, Lin, D, Guo, C.
登録日2021-03-16
公開日2021-03-31
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of peptide Bt14.12
To Be Published
7EES
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BU of 7ees by Molmil
NMR structure of the lasso peptide rubrivimycin
分子名称: GLY-THR-ILE-ASP-PRO-GLN-ASN-SER-GLU-GLU-HIS-PRO-VAL-LEU-SER-ARG-ARG-LEU-GLU-ASN
著者Xiu, H, Niu, X, Zhu, S.
登録日2021-03-19
公開日2022-03-23
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Insight into the biosynthesis of rubrivimycin provides new clue for the evolution of lasso peptides
To Be Published
7EH3
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Structure of Nanobody Nb23 in solution using NMR spectroscopy
分子名称: Nb23
著者Percipalle, M, Hunashal, Y, Esposito, G, Fogolari, F.
登録日2021-03-28
公開日2021-07-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of Nanobody Nb23.
Molecules, 26, 2021
7EL7
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BU of 7el7 by Molmil
NMR solution structure of the 1:1 complex of a quadruplex-duplex hybrid MYT1L and a platinum(II) ligand L1Pt(dien)
分子名称: G-quadruplex DNA MYT1L, Pt(diethylenetriamine)(2-(pyridin-4-ylmethyl)benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetraone)
著者Liu, L.-Y, Liu, W, Mao, Z.-W.
登録日2021-04-08
公開日2021-12-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Spatial Matching Selectivity and Solution Structure of Organic-Metal Hybrid to Quadruplex-Duplex Hybrid.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ELJ
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Prion Derived Tetrapeptide Stabilizes Thermolabile Insulin via Conformational Trapping
分子名称: IS1, Insulin A Chain, Insulin B chain
著者Banerjee, N.
登録日2021-04-11
公開日2021-04-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Prion-derived tetrapeptide stabilizes thermolabile insulin via conformational trapping.
Iscience, 24, 2021
7ELK
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Solution structure of Terfa derived from Danio rerio
分子名称: Terfa protein
著者Yun, J.H, Kim, M, Lee, W.
登録日2021-04-11
公開日2022-04-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Terfa derived from Danio rerio
To Be Published
7ELY
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A peptide with high affinity for B-Cell lymphoma2(Bcl-2)
分子名称: 16X_BCL
著者Fan, S, Zha, J, Wu, C.
登録日2021-04-12
公開日2021-05-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献An evolution-inspired strategy to design disulfide-rich peptides tolerant to extensive sequence manipulation.
Chem Sci, 12, 2021
7EN4
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Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.
分子名称: Ubiquitin carboxyl-terminal hydrolase YUH1
著者Okada, M, Tateishi, Y, Nojiri, E, Mikawa, T, Rajesh, S, Ogasawa, H, Ueda, T, Yagi, H, Kohno, T, Kigawa, T, Shimada, I, Guentert, P, Yutaka, I, Ikeya, T.
登録日2021-04-15
公開日2022-04-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.
To Be Published
7EUC
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Parallel G-quadruplex structure
分子名称: DNA (5'-D(*TP*TP*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*GP*GP*T)-3'), ...
著者Winnerdy, F.R, Devi, G, Ang, J.C.Y, Lim, K.W, Phan, A.T.
登録日2021-05-17
公開日2022-03-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Four-Layered Intramolecular Parallel G-Quadruplex with Non-Nucleotide Loops: An Ultra-Stable Self-Folded DNA Nano-Scaffold.
Acs Nano, 16, 2022
7EXY
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T-hairpin structure found in the RNA element involved in the piRNA biogenesis
分子名称: RNA (5'-R(*UP*UP*GP*GP*UP*UP*UP*GP*AP*UP*UP*CP*CP*AP*AP*G)-3')
著者Takase, N, Kawai, G.
登録日2021-05-29
公開日2022-03-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献T-hairpin structure found in the RNA element involved in piRNA biogenesis.
Rna, 28, 2022
7F32
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Ny-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases
分子名称: SYCNCLCRRGVCRCICTI
著者Xia, Y, Liu, C.F.
登録日2021-06-15
公開日2022-09-07
実験手法SOLUTION NMR
主引用文献N gamma-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F7N
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Solution structure of apo-WhiB4 from Mycobacterium tuberculosis
分子名称: Transcriptional regulator WhiB4
著者Xia, B, Duan, B.
登録日2021-06-30
公開日2021-11-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献DNA binding mechanism of WhiB4 from Mycobacterium tuberculosis
Magn Reson Lett, 2, 2022
7F7X
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BU of 7f7x by Molmil
Protein complex between phosphorylated ubiquitin and Ubqln2 UBA
分子名称: Polyubiquitin-B, Ubiquilin-2
著者Qin, L.Y, Dong, X, Tang, C.
登録日2021-06-30
公開日2022-05-18
実験手法SOLUTION NMR
主引用文献Kinetic Constraints in the Specific Interaction between Phosphorylated Ubiquitin and Proteasomal Shuttle Factors.
Biomolecules, 11, 2021
7FB8
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De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd1
分子名称: ASP-ASP-LYS-ASP-CYS-ASP-GLU-TYR-CYS-LYS-LYS-THR-LYS-GLU-NH2, GLU-LE1-THR-GLY-HIS-ILE-GLU-GLY-PRO-THR-LE1-THR-LE1-HIS-CYS-LYS-NH2
著者Yao, H, Yao, S, Zheng, Y, Moyer, A, Baker, D, Wu, C.
登録日2021-07-08
公開日2022-05-18
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献De novo design and directed folding of disulfide-bridged peptide heterodimers.
Nat Commun, 13, 2022
7FBA
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De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd2
分子名称: ALA-LE1-CYS-GLU-CYS-GLY-PRO-THR-ARG-GLU-CYS-LYS-NH2, GLU-CYS-ARG-GLU-TYR-GLY-PRO-LE1-LYS-LE1-LE1-ALA-NH2
著者Yao, H, Yao, S, Moyer, A, Zheng, Y, Baker, D, Wu, C.
登録日2021-07-08
公開日2022-05-18
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献De novo design and directed folding of disulfide-bridged peptide heterodimers.
Nat Commun, 13, 2022
7FBR
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BU of 7fbr by Molmil
Solution structure of The first RNA binding domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-12
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
7FBV
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The solution structure of the second RRM domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-13
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
7FGT
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BU of 7fgt by Molmil
Discovery of DS15060524; Gene targeting chimera (GeneTAC) for the treatment of Friedreich's Ataxia (FRDA)
分子名称: DNA (5'-D(*AP*AP*GP*AP*AP*GP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*CP*TP*TP*CP*TP*T)-3'), ~{N}-[3-[3-(dimethylamino)propylamino]-3-oxidanylidene-propyl]-1-methyl-4-[3-[[1-methyl-4-[[1-methyl-4-[3-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]propanoylamino]imidazol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]propanoylamino]imidazole-2-carboxamide
著者Takase, N, Kawai, G, Igarashi, W, Katagiri, T.
登録日2021-07-28
公開日2022-08-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Discovery of DS15060524; Gene targeting chimera (GeneTAC) for the treatment of Friedreich's Ataxia (FRDA)
To be published
7FHI
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Interaction between a fluoroquinolone derivative and RNAs with a single bulge
分子名称: 1-cyclopropyl-N-[3-(dimethylamino)propyl]-7-(4-ethylpiperazin-1-yl)-6-fluoranyl-4-oxidanylidene-quinoline-3-carboxamide, RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*CP*AP*UP*CP*C)-3')
著者Nagano, K, Kamimura, T, Kawai, G.
登録日2021-07-29
公開日2021-12-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Interaction between a fluoroquinolone derivative and RNAs with a single bulge.
J.Biochem., 171, 2022
7FHQ
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Solution structure of the pathogenic mutant G131V of Human prion protein (91-231)
分子名称: Major prion protein
著者Zhang, H, Lin, D.
登録日2021-07-29
公開日2022-07-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of the pathogenic mutant G131V of Human prion protein
To Be Published
7FJ0
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Interaction between a fluoroquinolone derivative and RNAs with a single bulge
分子名称: 1-cyclopropyl-N-[3-(dimethylamino)propyl]-7-(4-ethylpiperazin-1-yl)-6-fluoranyl-4-oxidanylidene-quinoline-3-carboxamide, RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*GP*AP*UP*CP*C)-3')
著者Nagano, K, Kamimura, T, Kawai, G.
登録日2021-08-02
公開日2021-12-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Interaction between a fluoroquinolone derivative and RNAs with a single bulge.
J.Biochem., 171, 2022

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