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新しい PDB エントリー
9OOI
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BU of 9ooi by Molmil
Crystal structure of dihydrofolate reductase (DHFR) from the filarial nematode W. bancrofti in complex with NADPH and antifolate 2-({4-[(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzoic acid (OG7 or TSD001)
分子名称: 2-({4-[(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzoic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, dihydrofolate reductase
著者Frey, K.M, Goodey, N.M, Kwarteng, S.
登録日2025-05-15
公開日2025-08-27
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献A virtual screening strategy to repurpose antifolate compounds as W. Bancrofti DHFR inhibitors.
Bioorg.Med.Chem.Lett., 2025
9OPZ
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BU of 9opz by Molmil
Structure of the sweet receptor bound to sucralose in the compact state, extracellular domain
分子名称: 4-chloro-4-deoxy-alpha-D-galactopyranose-(1-2)-1,6-dichloro-1,6-dideoxy-beta-D-fructofuranose, Taste receptor type 1 member 2, Taste receptor type 1 member 3
著者Wang, H, Chen, X, Dai, Y, Lee, C.H.
登録日2025-05-20
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structure of the sweet receptor bound to sucralose in the compact state, extracellular domain
To Be Published
9OQ0
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BU of 9oq0 by Molmil
Structure of the sweet receptor bound to sucralose in the compact state, transmembrane domain
分子名称: Taste receptor type 1 member 2, Taste receptor type 1 member 3
著者Wang, H, Chen, X, Dai, Y, Lee, C.H.
登録日2025-05-20
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structure of the sweet receptor bound to sucralose in the compact state, transmembrane domain
To Be Published
9OVH
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BU of 9ovh by Molmil
Structure of an ancestral ethylene forming enzyme, Anc357, in complex with Mn
分子名称: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, MANGANESE (II) ION
著者Chatterjee, S, Rankin, J.A, Farrugia, M.A, Hu, J, Hausinger, R.P.
登録日2025-05-30
公開日2025-08-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Ancestral Sequence Reconstruction of the Ethylene-Forming Enzyme.
Biochemistry, 64, 2025
9P0X
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BU of 9p0x by Molmil
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (nanodisc-subtracted)
分子名称: CALCIUM ION, Coagulation factor VII Heavy Chain, Factor VII light chain, ...
著者Photenhauer, A.L, Sedzro, J.C, Ohi, M.D, Morrissey, J.H.
登録日2025-06-07
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the tissue factor/factor VIIa complex with a factor X mimetic reveals a novel allosteric mechanism.
Blood, 2025
9P12
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BU of 9p12 by Molmil
Lysozyme Room-Temperature In-Situ, Shipped
分子名称: Lysozyme C, SODIUM ION
著者Snell, M.E, Campomizzi, C.S, Mikolajek, H, Sandy, J, Sanchez-Weatherby, J, Budziszewski, G.R, Hough, M.A, Bowman, S.E.J.
登録日2025-06-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Does crossing the pond affect crystal quality?
Biorxiv, 2025
9P13
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BU of 9p13 by Molmil
Lysozyme Room-Temperature In-Situ, Grown On-Site
分子名称: Lysozyme C, SODIUM ION
著者Snell, M.E, Campomizzi, C.S, Mikolajek, H, Sandy, J, Sanchez-Weatherby, J, Budziszewski, G.R, Hough, M.A, Bowman, S.E.J.
登録日2025-06-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Does crossing the pond affect crystal quality?
Biorxiv, 2025
9P14
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BU of 9p14 by Molmil
Thaumatin Room-Temperature In-Situ, Grown On-Site
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Snell, M.E, Campomizzi, C.S, Mikolajek, H, Sandy, J, Sanchez-Weatherby, J, Budziszewski, G.R, Hough, M.A, Bowman, S.E.J.
登録日2025-06-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Does crossing the pond affect crystal quality?
Biorxiv, 2025
9P15
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BU of 9p15 by Molmil
Thaumatin Room-Temperature In-Situ, Shipped
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Snell, M.E, Campomizzi, C.S, Mikolajek, H, Sandy, J, Sanchez-Weatherby, J, Budziszewski, G.R, Hough, M.A, Bowman, S.E.J.
登録日2025-06-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Does crossing the pond affect crystal quality?
Biorxiv, 2025
9P16
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BU of 9p16 by Molmil
Thermolysin Room-Temperature In-Situ, Grown On-Site
分子名称: CALCIUM ION, PHOSPHATE ION, Thermolysin, ...
著者Campomizzi, C.S, Snell, M.E, Mikolajek, H, Sandy, J, Sanchez-Weatherby, J, Budziszewski, G.R, Hough, M.A, Bowman, S.E.J.
登録日2025-06-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Does crossing the pond affect crystal quality?
Biorxiv, 2025
9P17
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BU of 9p17 by Molmil
Thermolysin Room-Temperature In-Situ, Shipped
分子名称: CALCIUM ION, PHOSPHATE ION, Thermolysin, ...
著者Campomizzi, C.S, Snell, M.E, Mikolajek, H, Sandy, J, Sanchez-Weatherby, J, Budziszewski, G.R, Hough, M.A, Bowman, S.E.J.
登録日2025-06-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Does crossing the pond affect crystal quality?
Biorxiv, 2025
9P4V
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BU of 9p4v by Molmil
Atomic model of wild type S. cerevisiae Fatty Acid Synthase (FAS) in complex with Palmitoyl-CoA (in vitro binding)
分子名称: FLAVIN MONONUCLEOTIDE, Fatty acid synthase subunit alpha, Fatty acid synthase subunit beta, ...
著者Hasan, N.S.M, Keszei, F.A.A, Mazhab-Jafari, M.T.
登録日2025-06-17
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Allosteric Regulation of Ketoacyl Reduction in Fungal Fatty Acid Synthases
To Be Published
9P4W
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BU of 9p4w by Molmil
Atomic model of wild type S. cerevisiae Fatty Acid Synthase (FAS)
分子名称: FLAVIN MONONUCLEOTIDE, Fatty acid synthase subunit alpha, Fatty acid synthase subunit beta, ...
著者Hasan, N.S.M, Keszei, F.A.A, Mazhab-Jafari, M.T.
登録日2025-06-17
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献Allosteric Regulation of Ketoacyl Reduction in Fungal Fatty Acid Synthases
To Be Published
9PGO
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BU of 9pgo by Molmil
Cryo-EM structure of brain-derived Tau fibril from Alzheimers disease patient tissue
分子名称: Microtubule-associated protein tau
著者Pierson, J.A, Sanchez, J.C, Kraemer, B.C, Wright, E.R, Latimer, S.C.
登録日2025-07-08
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献Cryo-EM structure of brain-derived Tau fibril from Alzheimers disease patient tissue
To Be Published
9PHI
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BU of 9phi by Molmil
[18-7B AC] 18 bp tensegrity triangle that propagates via blunt-end stacking with A stacking on C at the interface
分子名称: DNA (5'-D(*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*GP*AP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ...
著者Horvath, A, Woloszyn, K, Vecchioni, S, Ohayon, Y.P, Sha, R.
登録日2025-07-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (6.02 Å)
主引用文献Shifted tensegrity triangles
To Be Published
9PHK
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BU of 9phk by Molmil
[19-7B TG] 19 bp tensegrity triangle that propagates via blunt-end stacking with T stacking on G at the interface
分子名称: DNA (5'-D(*AP*GP*AP*TP*GP*T)-3'), DNA (5'-D(*GP*GP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), ...
著者Horvath, A, Woloszyn, K, Vecchioni, S, Ohayon, Y.P, Sha, R.
登録日2025-07-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (6.01 Å)
主引用文献Shifted tensegrity triangles
To Be Published
9PHM
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BU of 9phm by Molmil
[A4J-R] Asymmetric tensegrity triangle formed via toehold mediated displacement of the center strand
分子名称: DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*CP*AP*GP*AP*TP*AP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*TP*AP*CP*G)-3'), DNA (5'-D(*GP*AP*GP*CP*GP*AP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ...
著者Horvath, A, Wang, M, Woloszyn, K, Vecchioni, S, Ohayon, Y.P, Sha, R.
登録日2025-07-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (6.55 Å)
主引用文献Single stranded regions in Tensegrity Triangle
To Be Published
9PHP
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BU of 9php by Molmil
[19-7B AG] 19 bp tensegrity triangle that propagates via blunt-end stacking with A stacking on G at the interface
分子名称: DNA (5'-D(*GP*CP*AP*GP*CP*CP*TP*GP*TP*A)-3'), DNA (5'-D(*TP*GP*AP*TP*GP*TP*GP*GP*CP*TP*GP*C)-3'), DNA (5'-D(P*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ...
著者Horvath, A, Vecchioni, S, Woloszyn, K, Ohayon, Y.P, Sha, R.
登録日2025-07-09
公開日2025-08-27
実験手法X-RAY DIFFRACTION (4.33 Å)
主引用文献Shifted tensegrity triangles
To Be Published
9PLU
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BU of 9plu by Molmil
[20-7B TG] 20 bp tensegrity triangle that propagates via blunt-end stacking with T stacking on G at the interface
分子名称: DNA (5'-D(*AP*GP*AP*CP*TP*GP*TP*GP*GP*CP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*GP*CP*CP*TP*GP*TP*A)-3'), DNA (5'-D(P*CP*GP*GP*AP*CP*AP*GP*TP*CP*T)-3'), ...
著者Horvath, A, Woloszyn, K, Vecchioni, S, Ohayon, Y.P, Sha, R.
登録日2025-07-16
公開日2025-08-27
実験手法X-RAY DIFFRACTION (5.67 Å)
主引用文献Blunt-end Tensegrity Triangles
To Be Published
9PYF
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BU of 9pyf by Molmil
uPA Inhibitory Fab AB2 Complex
分子名称: AB2 Fab Heavy Chain, AB2 Fab Light Chain, Urokinase-type plasminogen activator
著者Anderson, K.J, Bohn, M.F.
登録日2025-08-07
公開日2025-08-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of an affinity-matured inhibitory recombinant fab against urokinase plasminogen activator reveals basis of potency and specificity.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
9Q1B
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BU of 9q1b by Molmil
MS2 bacteriophage coat protein after reassembly as a nanocrate (MS2nc) with no cargo and with waters modeled
分子名称: Capsid protein
著者Zimanyi, C.M, Bobe, D, Jenkins, M.C, Kopylov, M.
登録日2025-08-13
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (1.74 Å)
主引用文献Overcoming air-water interface-induced artifacts in Cryo-EM with protein nanocrates
To Be Published
9Q1D
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BU of 9q1d by Molmil
MS2 bacteriophage coat protein with waters modeled
分子名称: Capsid protein
著者Zimanyi, C.M, Bobe, D, Jenkins, M.C, Kopylov, M.
登録日2025-08-13
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (1.75 Å)
主引用文献Overcoming air-water interface-induced artifacts in Cryo-EM with protein nanocrates
To Be Published
9QCL
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BU of 9qcl by Molmil
S.aureus ClpC tetradecameric resting state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpC
著者Engelhardt, L, Carroni, M.
登録日2025-03-04
公開日2025-08-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Allosteric control of the bacterial ClpC/ClpP protease and its hijacking by antibacterial peptides
To Be Published
9QEU
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BU of 9qeu by Molmil
Structure of CHIP E3 ubiquitin ligase TPR domain in complex with compound 1
分子名称: E3 ubiquitin-protein ligase CHIP, SULFATE ION, ~{N}-[(1~{R},2~{R})-2-[[(1~{S})-1-(2-methoxyphenyl)-3-(methylamino)-3-oxidanylidene-propyl]carbamoyl]cyclopentyl]-4,5,6,7-tetrahydro-1~{H}-indazole-3-carboxamide
著者Breed, J.
登録日2025-03-11
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.353 Å)
主引用文献Discovery of Small-Molecule Ligands for the E3 Ligase STUB1/CHIP from a DNA-Encoded Library Screen.
Acs Med.Chem.Lett., 16, 2025
9QF1
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BU of 9qf1 by Molmil
Structure of CHIP E3 ubiquitin ligase TPR domain in complex with compound 2
分子名称: E3 ubiquitin-protein ligase CHIP, SULFATE ION, ~{N}-methyl-~{N}-[(1~{R})-1-pyridin-2-yl-3-pyrrolidin-1-yl-propyl]-5-[4,5,6,7-tetrakis(fluoranyl)-1~{H}-indol-3-yl]-1,3,4-oxadiazol-2-amine
著者Breed, J.
登録日2025-03-11
公開日2025-08-27
実験手法X-RAY DIFFRACTION (1.511 Å)
主引用文献Discovery of Small-Molecule Ligands for the E3 Ligase STUB1/CHIP from a DNA-Encoded Library Screen.
Acs Med.Chem.Lett., 16, 2025

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件を2025-08-27に公開中

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