PDB形式変換不可の PDB エントリー

7ACR	Structure of post-translocated trans-translation complex on E. coli stalled ribosome. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R. 登録日 2020-09-11 公開日 2021-08-18 最終更新日 2025-03-12 実験手法 ELECTRON MICROSCOPY (3.44 Å) 主引用文献 Structures of tmRNA and SmpB as they transit through the ribosome. Nat Commun, 12, 2021
7ADZ	Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the cap portion in extended state. 分子名称: Phage tail protein, Putative phage tail sheath protein FI, cap adaptor protein (Algo2), ... 著者 Xu, J, Ericson, C, Feldmueller, M, Lien, Y.W, Pilhofer, M. 登録日 2020-09-17 公開日 2022-02-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Identification and structure of an extracellular contractile injection system from the marine bacterium Algoriphagus machipongonensis. Nat Microbiol, 7, 2022
7AE0	Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the sheath-tube module in extended state. 分子名称: Phage tail protein, Putative phage tail sheath protein FI 著者 Xu, J, Ericson, C, Feldmueller, M, Lien, Y.W, Pilhofer, M. 登録日 2020-09-17 公開日 2022-02-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Identification and structure of an extracellular contractile injection system from the marine bacterium Algoriphagus machipongonensis. Nat Microbiol, 7, 2022
7AE4	Structure of Sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (ShVdcCD) in closed form 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Marshall, S.A, Leys, D. 登録日 2020-09-17 公開日 2021-08-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.31 Å) 主引用文献 Domain mobility and allosteric activation of UbiD decarboxylases To Be Published
7AEB	Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 6-fold symmetry. 分子名称: Baseplate_J domain-containing protein, LysM domain-containing protein, Phage tail protein, ... 著者 Xu, J, Ericson, C, Feldmueller, M, Lien, Y.W, Pilhofer, M. 登録日 2020-09-17 公開日 2022-02-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Identification and structure of an extracellular contractile injection system from the marine bacterium Algoriphagus machipongonensis. Nat Microbiol, 7, 2022
7AEF	Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 3-fold symmetry. 分子名称: Baseplate_J domain-containing protein, LysM domain-containing protein, Phage tail protein, ... 著者 Xu, J, Ericson, C, Feldmueller, M, Lien, Y.W, Pilhofer, M. 登録日 2020-09-17 公開日 2022-02-23 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Identification and structure of an extracellular contractile injection system from the marine bacterium Algoriphagus machipongonensis. Nat Microbiol, 7, 2022
7AEK	Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the contracted sheath shell. 分子名称: Putative phage tail sheath protein FI 著者 Xu, J, Ericson, C, Feldmueller, M, Lien, Y.W, Pilhofer, M. 登録日 2020-09-17 公開日 2022-02-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Identification and structure of an extracellular contractile injection system from the marine bacterium Algoriphagus machipongonensis. Nat Microbiol, 7, 2022
7AEL	alpha 1-antitrypsin (C232S) complexed with GSK716 分子名称: Alpha-1-antitrypsin, SULFATE ION, ~{N}-[(1~{S},2~{R})-1-(3-fluoranyl-2-methyl-phenyl)-1-oxidanyl-pentan-2-yl]-2-oxidanylidene-1,3-dihydroindole-4-carboxamide 著者 Chung, C. 登録日 2020-09-17 公開日 2021-03-10 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Development of a small molecule that corrects misfolding and increases secretion of Z alpha 1 -antitrypsin. Embo Mol Med, 13, 2021
7AET	Pressure wave-exposed human hemoglobin: probe only data (3500 indexed images) 分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Barends, T.R.M, Schlichting, I. 登録日 2020-09-18 公開日 2021-02-17 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.53 Å) 主引用文献 Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet. Nat Commun, 12, 2021
7AEU	Pressure wave-exposed human hemoglobin: probe only data (5500 indexed images) 分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Barends, T.R.M, Schlichting, I. 登録日 2020-09-18 公開日 2021-02-17 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet. Nat Commun, 12, 2021
7AEV	Pressure wave-exposed human hemoglobin: pump/probe data (3500 indexed images) 分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Barends, T.R.M, Schlichting, I. 登録日 2020-09-18 公開日 2021-02-17 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet. Nat Commun, 12, 2021
7AEW	14-3-3 sigma bound to bis-phosphorylated aminopeptidase N (APN, CD13) via canonical and non-canonical binding motifs 分子名称: 14-3-3 protein sigma, Aminopeptidase N, CHLORIDE ION, ... 著者 Kiehstaller, S, Hennig, S. 登録日 2020-09-18 公開日 2020-11-04 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 MMP activation-associated aminopeptidase N reveals a bivalent 14-3-3 binding motif. J.Biol.Chem., 295, 2020
7AEY	Salmonella typhimurium neuraminidase in complex with isocarba-DANA. 分子名称: (3~{S},4~{S},5~{R})-4-acetamido-3-oxidanyl-5-[(1~{S},2~{R})-1,2,3-tris(oxidanyl)propyl]cyclohexane-1-carboxylic acid, GLYCEROL, PHOSPHATE ION, ... 著者 Salinger, M.T, Kuhn, P, Laver, W.G, Pape, T, Schneider, T.R, Sheldrick, G.M, Vasella, A.T, Vimr, E.R, Vorwerk, S, Garman, E.F. 登録日 2020-09-18 公開日 2020-10-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (0.919 Å) 主引用文献 Salmonella typhimurium neuraminidase in complex with isocarba-DANA. To Be Published
7AF2	Salmonella typhimurium neuraminidase mutant (D62G) 分子名称: GLYCEROL, PHOSPHATE ION, Sialidase 著者 Salinger, M.T, Kuhn, P, Laver, W.G, Pape, T, Schneider, T.R, Sheldrick, G.M, Vimr, E.R, Garman, E.F. 登録日 2020-09-19 公開日 2020-09-30 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (0.792 Å) 主引用文献 Salmonella typhimurium neuraminidase mutant (D62G) To Be Published
7AGX	Apo-state type 3 secretion system export apparatus complex from Salmonella enterica typhimurium 分子名称: Protein PrgI, Protein PrgJ, Surface presentation of antigens protein SpaP, ... 著者 Goessweiner-Mohr, N, Fahrenkamp, D, Miletic, S, Wald, J, Marlovits, T. 登録日 2020-09-23 公開日 2021-03-17 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Substrate-engaged type III secretion system structures reveal gating mechanism for unfolded protein translocation. Nat Commun, 12, 2021
7AH2	Crystal structure of Zebrafish MDM2 RING domain homodimer 分子名称: E3 ubiquitin-protein ligase Mdm2, ZINC ION 著者 Magnussen, H.M, Huang, D.T. 登録日 2020-09-24 公開日 2021-01-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.872 Å) 主引用文献 Identification of a Catalytic Active but Non-Aggregating MDM2 RING Domain Variant. J.Mol.Biol., 433, 2021
7AH9	Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium - SpaR state 1 分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, LAURYL DIMETHYLAMINE-N-OXIDE, Lipoprotein PrgK, ... 著者 Fahrenkamp, D, Goessweiner-Mohr, N, Miletic, S, Wald, J, Marlovits, T. 登録日 2020-09-24 公開日 2021-03-17 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Substrate-engaged type III secretion system structures reveal gating mechanism for unfolded protein translocation Nat Commun, 12, 2021
7AHI	Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium - SpaR state 2 分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, LAURYL DIMETHYLAMINE-N-OXIDE, Lipoprotein PrgK, ... 著者 Fahrenkamp, D, Goessweiner-Mohr, N, Miletic, S, Wald, J, Marlovits, T. 登録日 2020-09-24 公開日 2021-03-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Substrate-engaged type III secretion system structures reveal gating mechanism for unfolded protein translocation Nat Commun, 12, 2021
7AHP	Crystal structure of Ixodes ricinus serpin - Iripin-3 分子名称: Putative salivary serpin, TRIS-HYDROXYMETHYL-METHYL-AMMONIUM 著者 Kascakova, B, Kuta Smatanova, I, Prudnikova, T. 登録日 2020-09-25 公開日 2021-03-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Iripin-3, a New Salivary Protein Isolated From Ixodes ricinus Ticks, Displays Immunomodulatory and Anti-Hemostatic Properties In Vitro Front Immunol, 12, 2021
7AHW	The crystal structure of gene product PA4063 from Pseudomonas aeruginosa 分子名称: Uncharacterized protein 著者 Fiorillo, A, Ilari, A. 登録日 2020-09-25 公開日 2021-10-06 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.952 Å) 主引用文献 Structure and metal-binding properties of PA4063, a novel player in periplasmic zinc trafficking by Pseudomonas aeruginosa. Acta Crystallogr D Struct Biol, 77, 2021
7AHY	Crystal structure of Western clawed frog MDM2 RING domain homodimer 分子名称: E3 ubiquitin-protein ligase Mdm2, ZINC ION 著者 Magnussen, H.M, Huang, D.T. 登録日 2020-09-25 公開日 2021-01-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.532 Å) 主引用文献 Identification of a Catalytic Active but Non-Aggregating MDM2 RING Domain Variant. J.Mol.Biol., 433, 2021
7AHZ	Crystal structure of Western clawed frog MDM2 RING domain homodimer bound to UbcH5B-Ub 分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, Polyubiquitin-B, ... 著者 Magnussen, H.M, Huang, D.T. 登録日 2020-09-25 公開日 2021-01-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Identification of a Catalytic Active but Non-Aggregating MDM2 RING Domain Variant. J.Mol.Biol., 433, 2021
7AI0	Crystal structure of human MDM2-G443T RING domain homodimer bound to UbcH5B-Ub (Crystal form 1) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, ... 著者 Magnussen, H.M, Huang, D.T. 登録日 2020-09-25 公開日 2021-01-20 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.559 Å) 主引用文献 Identification of a Catalytic Active but Non-Aggregating MDM2 RING Domain Variant. J.Mol.Biol., 433, 2021
7AI1	Crystal structure of human MDM2-G443T RING domain homodimer bound to UbcH5B-Ub (Crystal form 2) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, ... 著者 Magnussen, H.M, Huang, D.T. 登録日 2020-09-25 公開日 2021-01-20 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Identification of a Catalytic Active but Non-Aggregating MDM2 RING Domain Variant. J.Mol.Biol., 433, 2021
7AIA	Complex of human GDAP1 with hexadecanedioic acid 分子名称: ETHANOL, GLYCEROL, Ganglioside-induced differentiation-associated protein 1, ... 著者 Nguyen, G.T.T, Sutinen, A, Kursula, P. 登録日 2020-09-26 公開日 2021-02-24 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of the Complete Dimeric Human GDAP1 Core Domain Provides Insights into Ligand Binding and Clustering of Disease Mutations. Front Mol Biosci, 7, 2020

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