PDB形式変換不可の PDB エントリー

6XQD	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Batool, Z, Lomakin, I.B, Bunick, C.G, Polikanov, Y.S. 登録日 2020-07-09 公開日 2020-08-05 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Sarecycline interferes with tRNA accommodation and tethers mRNA to the 70S ribosome. Proc.Natl.Acad.Sci.USA, 117, 2020
6XQE	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Batool, Z, Lomakin, I.B, Bunick, C.G, Polikanov, Y.S. 登録日 2020-07-09 公開日 2020-08-05 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Sarecycline interferes with tRNA accommodation and tethers mRNA to the 70S ribosome. Proc.Natl.Acad.Sci.USA, 117, 2020
6XR8	Distinct conformational states of SARS-CoV-2 spike protein 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Zhang, J, Cai, Y.F, Xiao, T.S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Rawson, S, Volloch, S.R, Chen, B. 登録日 2020-07-11 公開日 2020-07-22 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Distinct conformational states of SARS-CoV-2 spike protein. Science, 369, 2020
6XTJ	The high resolution structure of the FERM domain of human FERMT2 分子名称: CITRIC ACID, Fermitin family homolog 2,Fermitin family homolog 2,Fermitin family homolog 2 著者 Bradshaw, W.J, Katis, V.L, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O. 登録日 2020-01-16 公開日 2020-02-12 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The high resolution structure of the FERM domain of human FERMT2 To Be Published
6XU6	Drosophila melanogaster Testis 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ... 著者 Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L. 登録日 2020-01-17 公開日 2021-07-28 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Nucleic Acids Res., 50, 2022
6XU7	Drosophila melanogaster Testis polysome ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ... 著者 Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L. 登録日 2020-01-17 公開日 2021-07-28 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Nucleic Acids Res., 50, 2022
6XU8	Drosophila melanogaster Ovary 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ... 著者 Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L. 登録日 2020-01-17 公開日 2021-07-28 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Nucleic Acids Res., 50, 2022
6XV5	Crystal structure of penicillin-binding protein 2 from Yersinia pestis in complex with ertapenem 分子名称: L(+)-TARTARIC ACID, Peptidoglycan D,D-transpeptidase MrdA 著者 Pankov, G, Hunter, W.N, Dawson, A. 登録日 2020-01-21 公開日 2021-02-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.673 Å) 主引用文献 The structure of penicillin-binding protein 2 from Yersinia pestis To Be Published
6XVX	X-ray structure obtained upon reaction of dirhodium tetraacetate with RNase A (high resolution) 分子名称: ACETATE ION, RHODIUM(III) ION, Ribonuclease pancreatic 著者 Merlino, A, Ferraro, G. 登録日 2020-01-22 公開日 2020-02-19 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Protein interactions of dirhodium tetraacetate: a structural study. Dalton Trans, 49, 2020
6XW0	X-ray structure obtained upon reaction of dirhodium tetraacetate with RNase A (low resolution) 分子名称: ACETATE ION, RHODIUM(III) ION, Ribonuclease pancreatic 著者 Merlino, A, Ferraro, G. 登録日 2020-01-22 公開日 2020-02-19 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Protein interactions of dirhodium tetraacetate: a structural study. Dalton Trans, 49, 2020
6XWK	Crystal structure of Phormidium rubidum phycocyanin 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IMIDAZOLE, ... 著者 Sonani, R.R, Roszak, A.W, Cogdell, R.J, Madamwar, D, Liu, H, Gross, M.L, Blankenship, R.E. 登録日 2020-01-23 公開日 2020-04-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.17 Å) 主引用文献 Revisiting high-resolution crystal structure of Phormidium rubidum phycocyanin. Photosyn. Res., 144, 2020
6XWZ	Carbonic Anhydrase II-mediated hydrolysis of selenolester 分子名称: GLYCEROL, ZINC ION, benzeneselenol, ... 著者 Angeli, A, Feraroni, M. 登録日 2020-01-24 公開日 2021-02-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Selenolesterase enzyme activity of carbonic anhydrases Chem.Commun.(Camb.), 2020
6XXF	1.7 Angstrom crystal structure of Ca/CaM:RyR2 peptide complex 分子名称: CALCIUM ION, Calmodulin-2, RyR2 Peptide 著者 Antonyuk, S, Helassa, N. 登録日 2020-01-27 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms. J.Cell.Sci., 135, 2022
6XXG	Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Deinococcus radiodurans 分子名称: 1-deoxy-D-xylulose-5-phosphate synthase,1-deoxy-D-xylulose-5-phosphate synthase, CALCIUM ION, MAGNESIUM ION, ... 著者 Gierse, R.M, Reddem, E, Grooves, M.R. 登録日 2020-01-27 公開日 2021-01-20 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 Identification of a 1-deoxy-D-xylulose-5-phosphate synthase (DXS) mutant with improved crystallographic properties. Biochem.Biophys.Res.Commun., 539, 2021
6XXX	1.25 Angstrom crystal structure of Ca/CaM A102V:RyR2 peptide complex 分子名称: CALCIUM ION, Calmodulin-1, LYS-LYS-ALA-VAL-TRP-HIS-LYS-LEU-LEU-SER-LYS-GLN-ARG-LYS-ARG-ALA-VAL-VAL-ALA-CYS-PHE 著者 Antonyuk, S, Helassa, N. 登録日 2020-01-28 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms. J.Cell.Sci., 135, 2022
6XY3	2.0 Angstrom crystal structure of Ca/CaM N53I:RyR2 peptide complex 分子名称: CALCIUM ION, Calmodulin-1, RyR2 peptide 著者 Antonyuk, S, Helassa, N. 登録日 2020-01-29 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms. J.Cell.Sci., 135, 2022
6XY7	Human SHIP1 with magnesium and phosphate bound to the active site 分子名称: DIMETHYL SULFOXIDE, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Bradshaw, W.J, Scacioc, A, Fernandez-Cid, A, Mckinley, G, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O. 登録日 2020-01-29 公開日 2020-02-26 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.086 Å) 主引用文献 Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2. Structure, 2024
6XYJ	Hfq from E.coli with inserted long loop L4 sequence 分子名称: RNA-binding protein Hfq 著者 Nikulin, A.D, Alipov, A.A, Lekontseva, N.V. 登録日 2020-01-30 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.772 Å) 主引用文献 Structure of a Mutant Form of Translation Regulator Hfq with the Extended Loop L4 Crystallography Reports, 66, 2021
6XYW	Structure of the plant mitochondrial ribosome 分子名称: 28S ribosomal S34 protein, 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, ... 著者 Soufari, H, Waltz, F, Bochler, A, Giege, P, Hashem, Y. 登録日 2020-01-31 公開日 2020-04-15 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.86 Å) 主引用文献 Cryo-EM structure of the RNA-rich plant mitochondrial ribosome. Nat.Plants, 6, 2020
6XZA	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pichkur, E.B, Polikanov, Y.S, Myasnikov, A.G, Konevega, A.L. 登録日 2020-02-03 公開日 2020-11-04 最終更新日 2025-03-12 実験手法 ELECTRON MICROSCOPY (2.66 Å) 主引用文献 Insights into the improved macrolide inhibitory activity from the high-resolution cryo-EM structure of dirithromycin bound to the E. coli 70S ribosome. Rna, 26, 2020
6XZB	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pichkur, E.B, Polikanov, Y.S, Myasnikov, A.G, Konevega, A.L. 登録日 2020-02-03 公開日 2020-11-04 最終更新日 2025-03-12 実験手法 ELECTRON MICROSCOPY (2.54 Å) 主引用文献 Insights into the improved macrolide inhibitory activity from the high-resolution cryo-EM structure of dirithromycin bound to the E. coli 70S ribosome. Rna, 26, 2020
6XZD	Influenza C virus polymerase complex without chicken ANP32A - Subclass 2 分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*AP*GP*UP*AP*GP*AP*AP*AP*CP*AP*AP*GP*GP*GP*CP*CP*CP*UP*GP*C)-3'), ... 著者 Keown, J.R, Carrique, L, Fan, H, Grimes, J.M, Fodor, E. 登録日 2020-02-04 公開日 2020-12-23 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Host ANP32A mediates the assembly of the influenza virus replicase. Nature, 587, 2020
6XZG	Influenza C virus polymerase in complex with chicken ANP32A - Subclass 3 分子名称: Influenza viral RNA (vRNA) promoter 47mer, LRRcap domain-containing protein, Polymerase acidic protein, ... 著者 Carrique, L, Keown, J.R, Fan, H, Grimes, J.M, Fodor, E. 登録日 2020-02-04 公開日 2020-11-25 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Host ANP32A mediates the assembly of the influenza virus replicase. Nature, 587, 2020
6XZP	Influenza C virus polymerase in complex with chicken ANP32A - Subclass 4 分子名称: LRRcap domain-containing protein, Polymerase acidic protein, Polymerase basic protein 2, ... 著者 Carrique, L, Keown, J.R, Fan, H, Grimes, J.M, Fodor, E. 登録日 2020-02-05 公開日 2020-11-25 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Host ANP32A mediates the assembly of the influenza virus replicase. Nature, 587, 2020
6XZR	Influenza C virus polymerase in complex with chicken ANP32A - Subclass 1 分子名称: LRRcap domain-containing protein, Polymerase acidic protein, Polymerase basic protein 2, ... 著者 Carrique, L, Keown, J.R, Fan, H, Grimes, J.M, Fodor, E. 登録日 2020-02-05 公開日 2020-11-25 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Host ANP32A mediates the assembly of the influenza virus replicase. Nature, 587, 2020

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