Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB形式変換不可の PDB エントリー
6I7O
DownloadVisualize
BU of 6i7o by Molmil
The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Tesina, P, Cheng, J, Becker, T, Beckmann, R.
登録日2018-11-16
公開日2019-01-16
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways.
EMBO J., 38, 2019
6I7V
DownloadVisualize
BU of 6i7v by Molmil
Ribosomal protein paralogs bL31 and bL36
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ...
著者Pulk, A, Cate, J.H.D, Remme, J, Lilleorg, S, Reier, K, Peil, L, Liiv, A, Tammsalu, T.
登録日2018-11-19
公開日2018-12-05
最終更新日2025-03-12
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Bacterial ribosome heterogeneity: Changes in ribosomal protein composition during transition into stationary growth phase.
Biochimie, 156, 2018
6I9R
DownloadVisualize
BU of 6i9r by Molmil
Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Modelska, A, Aibara, S, Amunts, A.
登録日2018-11-25
公開日2020-07-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Inhibition of mitochondrial translation suppresses glioblastoma stem cell growth.
Cell Rep, 35, 2021
6IA9
DownloadVisualize
BU of 6ia9 by Molmil
urate oxidase under 2000 bar (220 MPa) of argon
分子名称: 8-AZAXANTHINE, ACETYL GROUP, ARGON, ...
著者Prange, T, Colloc'h, N, Carpentier, P.
登録日2018-11-26
公開日2019-12-18
最終更新日2025-07-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization.
Acta Crystallogr D Struct Biol, 78, 2022
6IGC
DownloadVisualize
BU of 6igc by Molmil
Crystal structure of HPV58/33/52 chimeric L1 pentamer
分子名称: Major capsid protein L1
著者Li, Z.H, Song, S, He, M.Z, Gu, Y, Li, S.W.
登録日2018-09-25
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Rational design of a triple-type human papillomavirus vaccine by compromising viral-type specificity.
Nat Commun, 9, 2018
6IP5
DownloadVisualize
BU of 6ip5 by Molmil
Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
登録日2018-11-02
公開日2019-05-29
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
6IP6
DownloadVisualize
BU of 6ip6 by Molmil
Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
登録日2018-11-02
公開日2019-05-29
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
6IP8
DownloadVisualize
BU of 6ip8 by Molmil
Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
登録日2018-11-02
公開日2019-05-29
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
6IQH
DownloadVisualize
BU of 6iqh by Molmil
X-ray crystal structure of covalent-bonded complex of Fc and peptide
分子名称: 17-mer peptide (GPDCAYHKGELVWCTFH), 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin gamma-1 heavy chain
著者Adachi, M, Ito, Y.
登録日2018-11-08
公開日2019-02-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.999 Å)
主引用文献Site-Specific Chemical Conjugation of Antibodies by Using Affinity Peptide for the Development of Therapeutic Antibody Format.
Bioconjug. Chem., 30, 2019
6J0N
DownloadVisualize
BU of 6j0n by Molmil
Cryo-EM Structure of an Extracellular Contractile Injection System, baseplate in extended state, refined in C6 symmetry
分子名称: Pvc1, Pvc11, Pvc12, ...
著者Jiang, F, Li, N, Wang, X, Cheng, J, Huang, Y, Yang, Y, Yang, J, Cai, B, Wang, Y, Jin, Q, Gao, N.
登録日2018-12-25
公開日2019-04-10
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM Structure and Assembly of an Extracellular Contractile Injection System.
Cell, 177, 2019
6J2C
DownloadVisualize
BU of 6j2c by Molmil
Yeast proteasome in translocation competent state (C3-a)
分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
著者Cong, Y.
登録日2019-01-01
公開日2019-03-13
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.
Mol. Cell, 73, 2019
6J2N
DownloadVisualize
BU of 6j2n by Molmil
yeast proteasome in substrate-processing state (C3-b)
分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
著者Cong, Y.
登録日2019-01-02
公開日2019-03-20
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.
Mol. Cell, 73, 2019
6J2Q
DownloadVisualize
BU of 6j2q by Molmil
Yeast proteasome in Ub-accepted state (C1-b)
分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
著者Cong, Y.
登録日2019-01-02
公開日2019-03-13
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.
Mol. Cell, 73, 2019
6J2X
DownloadVisualize
BU of 6j2x by Molmil
Yeast proteasome in resting state (C1-a)
分子名称: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASOME REGULATORY SUBUNIT RPN5, 26S proteasome complex subunit SEM1, ...
著者Cong, Y.
登録日2019-01-03
公開日2019-03-13
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.
Mol. Cell, 73, 2019
6J30
DownloadVisualize
BU of 6j30 by Molmil
yeast proteasome in Ub-engaged state (C2)
分子名称: 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, ...
著者Cong, Y.
登録日2019-01-03
公開日2019-03-20
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.
Mol. Cell, 73, 2019
6J3Y
DownloadVisualize
BU of 6j3y by Molmil
Structure of C2S2-type PSII-FCPII supercomplex from diatom
分子名称: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Nagao, R, Kato, K, Shen, J.R, Miyazaki, N, Akita, F.
登録日2019-01-07
公開日2019-08-07
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for energy harvesting and dissipation in a diatom PSII-FCPII supercomplex.
Nat.Plants, 5, 2019
6J3Z
DownloadVisualize
BU of 6j3z by Molmil
Structure of C2S1M1-type PSII-FCPII supercomplex from diatom
分子名称: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Nagao, R, Kato, K, Shen, J.R, Miyazaki, N, Akita, F.
登録日2019-01-07
公開日2019-08-07
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for energy harvesting and dissipation in a diatom PSII-FCPII supercomplex.
Nat.Plants, 5, 2019
6J40
DownloadVisualize
BU of 6j40 by Molmil
Structure of C2S2M2-type PSII-FCPII supercomplex from diatom
分子名称: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Nagao, R, Kato, K, Shen, J.R, Miyazaki, N, Akita, F.
登録日2019-01-07
公開日2019-08-07
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis for energy harvesting and dissipation in a diatom PSII-FCPII supercomplex.
Nat.Plants, 5, 2019
6J5K
DownloadVisualize
BU of 6j5k by Molmil
Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F1 subunit alpha, ...
著者Gu, J, Zhang, L, Yi, J, Yang, M.
登録日2019-01-11
公開日2019-06-26
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
6JEO
DownloadVisualize
BU of 6jeo by Molmil
Structure of PSI tetramer from Anabaena
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Kato, K, Nagao, R, Shen, J.R, Miyazaki, N, Akita, F.
登録日2019-02-06
公開日2019-11-13
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of a cyanobacterial photosystem I tetramer revealed by cryo-electron microscopy.
Nat Commun, 10, 2019
6JG3
DownloadVisualize
BU of 6jg3 by Molmil
Cryo-EM structure of RyR2 (Ca2+ alone dataset)
分子名称: Ryanodine receptor 2, ZINC ION
著者Chi, X.M, Gong, D.S, Ren, K, Zhou, G.W, Huang, G.X.Y, Lei, J.L, Zhou, Q, Yan, N.
登録日2019-02-13
公開日2019-12-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Molecular basis for allosteric regulation of the type 2 ryanodine receptor channel gating by key modulators.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JGZ
DownloadVisualize
BU of 6jgz by Molmil
Structure of RyR2 (F/P/Ca2+ dataset)
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, RyR2, ZINC ION
著者Chi, X.M, Gong, D.S, Ren, K, Zhou, G.W, Huang, G.X.Y, Lei, J.L, Zhou, Q, Yan, N.
登録日2019-02-16
公開日2019-12-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Molecular basis for allosteric regulation of the type 2 ryanodine receptor channel gating by key modulators.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JH6
DownloadVisualize
BU of 6jh6 by Molmil
Structure of RyR2 (F/A/Ca2+ dataset)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Peptidyl-prolyl cis-trans isomerase FKBP1B, RyR2, ...
著者Chi, X.M, Gong, D.S, Ren, K, Zhou, G.W, Huang, G.X.Y, Lei, J.L, Zhou, Q, Yan, N.
登録日2019-02-17
公開日2019-12-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Molecular basis for allosteric regulation of the type 2 ryanodine receptor channel gating by key modulators.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JHN
DownloadVisualize
BU of 6jhn by Molmil
Structure of RyR2 (F/C/Ca2+ dataset)
分子名称: CAFFEINE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ...
著者Chi, X.M, Gong, D.S, Ren, K, Zhou, G.W, Huang, G.X.Y, Lei, J.L, Zhou, Q, Yan, N.
登録日2019-02-18
公開日2019-12-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Molecular basis for allosteric regulation of the type 2 ryanodine receptor channel gating by key modulators.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JI0
DownloadVisualize
BU of 6ji0 by Molmil
Structure of RyR2 (F/A/C/Ca2+ dataset)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Gong, D.S, Chi, X.M, Zhou, G.W, Huang, G.X.Y, Lei, J.L, Yan, N.
登録日2019-02-19
公開日2019-07-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Modulation of cardiac ryanodine receptor 2 by calmodulin.
Nature, 572, 2019

240681

件を2025-08-20に公開中

PDB statisticsPDBj update infoContact PDBjnumon