PDB形式変換不可の PDB エントリー

3JCO	Structure of yeast 26S proteasome in M1 state derived from Titan dataset 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F. 登録日 2016-01-06 公開日 2016-06-15 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structure of an endogenous yeast 26S proteasome reveals two major conformational states. Proc.Natl.Acad.Sci.USA, 113, 2016
3JCP	Structure of yeast 26S proteasome in M2 state derived from Titan dataset 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F. 登録日 2016-01-06 公開日 2016-06-15 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of an endogenous yeast 26S proteasome reveals two major conformational states. Proc.Natl.Acad.Sci.USA, 113, 2016
3JCS	2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania 分子名称: 26S alpha ribosomal RNA, 26S delta ribosomal RNA, 26S epsilon ribosomal RNA, ... 著者 Shalev-Benami, M, Zhang, Y, Matzov, D, Halfon, Y, Zackay, A, Rozenberg, H, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G. 登録日 2016-01-21 公開日 2016-07-20 最終更新日 2025-06-11 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 2.8- angstrom Cryo-EM Structure of the Large Ribosomal Subunit from the Eukaryotic Parasite Leishmania. Cell Rep, 16, 2016
3JCT	Cryo-em structure of eukaryotic pre-60S ribosomal subunits 分子名称: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ... 著者 Wu, S, Kumcuoglu, B, Yan, K.G, Brown, H, Zhang, Y.X, Tan, D, Gamalinda, M, Yuan, Y, Li, Z.F, Jakovljevic, J, Ma, C.Y, Lei, J.L, Dong, M.Q, Woolford Jr, J.L, Gao, N. 登録日 2016-03-09 公開日 2016-06-01 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.08 Å) 主引用文献 Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes Nature, 534, 2016
3K1Q	Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics 分子名称: Core protein VP6, Outer capsid VP5, Outer capsid VP7, ... 著者 Cheng, L.P, Zhu, J, Hiu, W.H, Zhang, X.K, Honig, B, Fang, Q, Zhou, Z.H. 登録日 2009-09-28 公開日 2010-03-23 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Backbone Model of an Aquareovirus Virion by Cryo-Electron Microscopy and Bioinformatics J.Mol.Biol., 397, 2010
3RLH	Crystal structure of a class II phospholipase D from Loxosceles intermedia venom 分子名称: (2r,5r)-5-amino-2-hydroxy-5-(hydroxymethyl)-1,3,2lambda~5~-dioxaphosphinan-2-one, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ... 著者 Giuseppe, P.O, Ullah, A, Veiga, S.S, Murakami, M.T, Arni, R.K, Doherty, D.Z, Gismene, C, Bachega, J.F.R, Chahine, J, Gonzalez, J.E.H. 登録日 2011-04-19 公開日 2011-06-29 最終更新日 2025-02-19 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Structure of a novel class II phospholipase D: Catalytic cleft is modified by a disulphide bridge. Biochem.Biophys.Res.Commun., 409, 2011
3RME	AMCase in complex with Compound 5 分子名称: Acidic mammalian chitinase, GLYCEROL, N-ethyl-2-(4-methylpiperazin-1-yl)pyridine-3-carboxamide 著者 Olland, A. 登録日 2011-04-20 公開日 2011-08-24 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Identification and Characterization of Acidic Mammalian Chitinase Inhibitors J.Med.Chem., 53, 2010
3WHE	A new conserved neutralizing epitope at the globular head of hemagglutinin in H3N2 influenza viruses 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Fujii, Y, Sumida, T, Shirouzu, M, Yokoyama, S. 登録日 2013-08-25 公開日 2014-04-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Conserved neutralizing epitope at globular head of hemagglutinin in H3N2 influenza viruses. J.Virol., 88, 2014
4ABZ	TetR(D) in Complex with Tigecycline and Magnesium, co-crystallized 分子名称: CHLORIDE ION, MAGNESIUM ION, TIGECYCLINE, ... 著者 Volkers, G, Hinrichs, W. 登録日 2011-12-12 公開日 2012-12-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.886 Å) 主引用文献 TetR(D) in Complex with Tigecycline and Magnesium To be Published
4BP7	Asymmetric structure of a virus-receptor complex 分子名称: COAT PROTEIN 著者 Dent, K.C, Thompson, R, Barker, A.M, Barr, J.N, Hiscox, J.A, Stockley, P.G, Ranson, N.A. 登録日 2013-05-23 公開日 2013-07-17 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (39 Å) 主引用文献 The Asymmetric Structure of an Icosahedral Virus Bound its Receptor Suggests a Mechanism for Genome Release. Structure, 21, 2013
4BTS	THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A 分子名称: 18S ribosomal RNA, 40S RIBOSOMAL PROTEIN RACK1, 40S RIBOSOMAL PROTEIN RPS10E, ... 著者 Weisser, M, Voigts-Hoffmann, F, Rabl, J, Leibundgut, M, Ban, N. 登録日 2013-06-19 公開日 2013-07-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.703 Å) 主引用文献 The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A. Nat. Struct. Mol. Biol., 20, 2013
4CTF	The limits of structural plasticity in a picornavirus capsid revealed by a massively expanded equine rhinitis A virus particle 分子名称: EQUINE RHINITIS A VIRUS, P1, VP1 著者 Bakker, S.E, Groppelli, E, Pearson, A.R, Stockley, P.G, Rowlands, D.J, Ranson, N.A. 登録日 2014-03-13 公開日 2014-05-21 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (17 Å) 主引用文献 Limits of Structural Plasticity in a Picornavirus Capsid Revealed by a Massively Expanded Equine Rhinitis a Virus Particle. J.Virol., 88, 2014
4CTG	The limits of structural plasticity in a picornavirus capsid revealed by a massively expanded equine rhinitis A virus particle 分子名称: P1 著者 Bakker, S.E, Groppelli, E, Pearson, A.R, Stockley, P.G, Rowlands, D.J, Ranson, N.A. 登録日 2014-03-13 公開日 2014-05-21 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (17 Å) 主引用文献 Limits of Structural Plasticity in a Picornavirus Capsid Revealed by a Massively Expanded Equine Rhinitis a Virus Particle. J.Virol., 88, 2014
4D5Y	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state 分子名称: 28S Ribosomal RNA, 5.8S Ribosomal RNA, 5S Ribosomal RNA, ... 著者 Muhs, M, Hilal, T, Mielke, T, Skabkin, M.A, Sanbonmatsu, K.Y, Pestova, T.V, Spahn, C.M.T. 登録日 2014-11-07 公開日 2015-03-04 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 Cryo-Em Structures of Ribosomal 80S Complexes with Termination Factors and Cricket Paralysis Virus Ires Reveal the Ires in the Translocated State Mol.Cell, 57, 2015
4D67	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state 分子名称: 28S RRNA, 5.8S RRNA, 5S RRNA, ... 著者 Muhs, M, Hilal, T, Mielke, T, Skabkin, M.A, Sanbonmatsu, K.Y, Pestova, T.V, Spahn, C.M.T. 登録日 2014-11-10 公開日 2015-03-04 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 Cryo-Em Structures of Ribosomal 80S Complexes with Termination Factors and Cricket Paralysis Virus Ires Reveal the Ires in the Translocated State Mol.Cell, 57, 2015
4DCB	Y. pestis Plasminogen Activator Pla in Complex with Human Plasminogen Activation Loop Peptide ALP11 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ... 著者 Eren, E, van den Berg, B. 登録日 2012-01-17 公開日 2012-06-06 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (2.033 Å) 主引用文献 Structural basis for activation of an integral membrane protease by lipopolysaccharide. J.Biol.Chem., 287, 2012
4FHN	Nup37-Nup120 full-length complex from Schizosaccharomyces pombe 分子名称: Glutamate dehydrogenase, NUCLEOPORIN NUP37, Nucleoporin nup120 著者 Bilokapic, S, Schwartz, T.U. 登録日 2012-06-06 公開日 2012-09-26 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (6.989 Å) 主引用文献 Molecular basis for Nup37 and ELY5/ELYS recruitment to the nuclear pore complex. Proc.Natl.Acad.Sci.USA, 109, 2012
4FQR	Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Broadly neutralizing antibody C05, ... 著者 Ekiert, D.C, Wilson, I.A. 登録日 2012-06-25 公開日 2012-09-19 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (4.1 Å) 主引用文献 Cross-neutralization of influenza A viruses mediated by a single antibody loop. Nature, 489, 2012
4FRT	Crystal Structure of Pseudomonas aeruginosa OccK7 (OpdD) 分子名称: Probable porin 著者 Eren, E, van den Berg, B. 登録日 2012-06-26 公開日 2013-07-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.166 Å) 主引用文献 Crystal Structures of OccK Subfamily Proteins To be Published
4L47	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-06-07 公開日 2014-08-06 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.22000098079 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4L71	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-06-13 公開日 2014-08-06 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (3.90000100875 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4LEL	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-06-25 公開日 2014-08-06 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.90000024172 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4LFZ	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-06-27 公開日 2014-08-06 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (3.92000059074 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4LNT	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-07-12 公開日 2014-08-06 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (2.94000009954 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4LSK	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-07-22 公開日 2014-08-06 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (3.48000627319 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014

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