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PDB形式変換不可の PDB エントリー
9EYU
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Human PRMT5 in complex with AZ compound 1
分子名称: (1~{S})-2-[(2-carbamimidamido-1,3-thiazol-5-yl)methyl]-~{N}-[(4-fluorophenyl)methyl]-3-oxidanylidene-1~{H}-isoindole-1-carboxamide, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein WDR77, ...
著者Debreczeni, J.
登録日2024-04-09
公開日2024-08-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Discovery and In Vivo Efficacy of AZ-PRMT5i-1, a Novel PRMT5 Inhibitor with High MTA Cooperativity.
J.Med.Chem., 67, 2024
9EYV
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Human PRMT5 in complex with AZ compound 12
分子名称: (1~{S})-~{N}-[(4-fluorophenyl)methyl]-3-oxidanylidene-2-(1~{H}-pyrrolo[3,2-b]pyridin-2-ylmethyl)-1~{H}-isoindole-1-carboxamide, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein WDR77, ...
著者Debreczeni, J.
登録日2024-04-09
公開日2024-08-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery and In Vivo Efficacy of AZ-PRMT5i-1, a Novel PRMT5 Inhibitor with High MTA Cooperativity.
J.Med.Chem., 67, 2024
9EYW
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Human PRMT5 in complex with AZ compound 21
分子名称: (3~{S})-2-[(5-azanyl-1~{H}-pyrrolo[3,2-b]pyridin-2-yl)methyl]-6-fluoranyl-1'-[(4-fluorophenyl)methyl]spiro[isoindole-3,3'-pyrrolidine]-1,2'-dione, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein WDR77, ...
著者Debreczeni, J.
登録日2024-04-09
公開日2024-08-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery and In Vivo Efficacy of AZ-PRMT5i-1, a Novel PRMT5 Inhibitor with High MTA Cooperativity.
J.Med.Chem., 67, 2024
9EYX
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Human PRMT5 in complex with AZ compound 28
分子名称: (3~{S})-2-[(5-azanyl-6-fluoranyl-1~{H}-pyrrolo[3,2-b]pyridin-2-yl)methyl]-6-fluoranyl-1'-[(4-fluorophenyl)methyl]spiro[isoindole-3,3'-pyrrolidine]-1,2'-dione, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein WDR77, ...
著者Debreczeni, J.
登録日2024-04-09
公開日2024-08-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery and In Vivo Efficacy of AZ-PRMT5i-1, a Novel PRMT5 Inhibitor with High MTA Cooperativity.
J.Med.Chem., 67, 2024
9EZ1
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Vitamin D receptor in complex with 1,4a,25-trihydroxyvitamin D3
分子名称: 1,4a,25-trihydroxyvitamin D3, ACETATE ION, Nuclear receptor coactivator 2, ...
著者Rochel, N.
登録日2024-04-10
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献4-Hydroxy-1 alpha ,25-Dihydroxyvitamin D 3 : Synthesis and Structure-Function Study.
Biomolecules, 14, 2024
9EZ2
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Vitamin D receptor complex with 1,4b,25-trihydroxyvitamin D3
分子名称: 1,4b,25-trihydroxyvitamin D3, ACETATE ION, Nuclear receptor coactivator 2, ...
著者Rochel, N.
登録日2024-04-10
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献4-Hydroxy-1 alpha ,25-Dihydroxyvitamin D 3 : Synthesis and Structure-Function Study.
Biomolecules, 14, 2024
9EZ3
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Crystal structure of human CLK3 bound to RN129
分子名称: 1-(5-~{tert}-butyl-2-quinolin-6-yl-pyrazol-3-yl)-3-[3-(4-morpholin-4-yl-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]urea, Dual specificity protein kinase CLK3, SULFATE ION
著者Kraemer, A, Raig, N, Knapp, S.
登録日2024-04-10
公開日2024-09-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of human CLK3 bound to RN129
To Be Published
9EZG
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Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((4-((2-aminoethyl)(ethyl)amino)-3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
分子名称: 1,2-ETHANEDIOL, 5-[[4-[2-azanylethyl(ethyl)amino]-3-(1,2,4-triazol-4-yl)phenyl]amino]-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile, Casein kinase II subunit alpha, ...
著者Kraemer, A, Ong, H.W, Yang, X, Brown, J.W, Chang, E, Willson, T, Knapp, S, Structural Genomics Consortium (SGC)
登録日2024-04-12
公開日2024-07-31
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献More than an Amide Bioisostere: Discovery of 1,2,4-Triazole-containing Pyrazolo[1,5- a ]pyrimidine Host CSNK2 Inhibitors for Combatting beta-Coronavirus Replication.
J.Med.Chem., 67, 2024
9EZJ
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Apo human TDO in complex with a bound inhibitor (Cpd-4)
分子名称: Tryptophan 2,3-dioxygenase, alpha-methyl-L-tryptophan, ethyl (9~{R})-2-methoxy-4-oxidanylidene-9-[[(1~{S})-1-phenylethyl]-[(2-propan-2-ylphenyl)carbamoyl]amino]-6,7,8,9-tetrahydropyrido[1,2-a]pyrimidine-3-carboxylate
著者Wicki, M, Mac Sweeney, A.
登録日2024-04-12
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.612 Å)
主引用文献Discovery and binding mode of small molecule inhibitors of the apo form of human TDO2
To Be Published
9F1B
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Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Yudin, D, Scaiola, A, Ban, N.
登録日2024-04-18
公開日2024-08-21
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献NAC guides a ribosomal multienzyme complex for nascent protein processing.
Nature, 2024
9F1C
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Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Yudin, D, Scaiola, A, Ban, N.
登録日2024-04-18
公開日2024-08-21
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (3.78 Å)
主引用文献NAC guides a ribosomal multienzyme complex for nascent protein processing.
Nature, 2024
9F1D
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Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Yudin, D, Scaiola, A, Ban, N.
登録日2024-04-18
公開日2024-08-21
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献NAC guides a ribosomal multienzyme complex for nascent protein processing.
Nature, 2024
9F1J
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First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 14
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, N-[2-[2-[2-[2-[2-[2-[2,6-bis(oxidanylidene)piperidin-3-yl]-1,3-bis(oxidanylidene)isoindol-4-yl]oxyethanoylamino]ethoxy]ethoxy]ethoxy]ethyl]-4-[4-[2-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-(2-morpholin-4-ylethyl)benzimidazol-2-yl]ethyl]phenoxy]butanamide
著者Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2024-04-19
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.13003035503 Å)
主引用文献First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 14
to be published
9F1K
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First bromodomain of BRD4 in complex with ISOX-DUAL based inhibitor 30
分子名称: 1,2-ETHANEDIOL, 2-[4-[2-[2-[2-[4-[3-(dimethylamino)propoxy]phenyl]ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzimidazol-1-yl]ethyl]piperazin-1-yl]-N-(2-methoxyethyl)ethanamide, Bromodomain-containing protein 4
著者Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2024-04-19
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献First bromodomain of BRD4 in complex with ISOX-DUAL based inhibitor 30
to be published
9F1L
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First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 35
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, N-[2-[2-[(3R)-2,6-bis(oxidanylidene)piperidin-3-yl]-1,3-bis(oxidanylidene)isoindol-4-yl]oxyethyl]-2-[4-[2-[2-[2-[4-[3-(dimethylamino)propoxy]phenyl]ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzimidazol-1-yl]ethyl]piperazin-1-yl]ethanamide
著者Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2024-04-19
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.30000625447 Å)
主引用文献First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 35
to be published
9F1M
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First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 45
分子名称: 1,2-ETHANEDIOL, 1-[2-[7-[2-[4-[2-[2-[2-[4-[3-(dimethylamino)propoxy]phenyl]ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzimidazol-1-yl]ethyl]piperazin-1-yl]ethanoylamino]heptanoylamino]-3,3-dimethyl-butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Bromodomain-containing protein 4, ...
著者Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2024-04-19
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.90001265923 Å)
主引用文献First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 45
to be published
9F1N
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First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 46
分子名称: (2S,4R)-1-[(2S)-2-[9-[2-[4-[2-[2-[2-[4-[3-(dimethylamino)propoxy]phenyl]ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzimidazol-1-yl]ethyl]piperazin-1-yl]ethanoylamino]nonanoylamino]-3,3-dimethyl-butanoyl]-N-[[4-(4-methyl-4H-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
著者Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2024-04-19
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.71000018061 Å)
主引用文献First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 46
to be published
9F3W
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CutC choline lyase in complex with fluoromethylcholine
分子名称: Choline trimethylamine-lyase, fluoromethylcholine
著者Kalnins, G.
登録日2024-04-26
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献CutC choline lyase in complex with fluoromethylcholine
To Be Published
9F3X
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CutC choline lyase in complex with cyclopropylcholine
分子名称: Choline trimethylamine-lyase, cyclopropylcholine
著者Kalnins, G.
登録日2024-04-26
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献CutC choline lyase in complex with fluoromethylcholine
To Be Published
9F3Y
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CutC choline lyase in complex with difluorocholine
分子名称: Choline trimethylamine-lyase, difluorocholine
著者Kalnins, G.
登録日2024-04-26
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献CutC choline lyase in complex with difluorocholine
To Be Published
9F4F
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UP1 in complex with Z86417414
分子名称: 2-fluoranyl-~{N}-(1,3,4-thiadiazol-2-yl)benzamide, Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed
著者Dunnett, L, Prischi, F.
登録日2024-04-27
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
9F4K
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UP1 in complex with ZINC72259689
分子名称: Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed, ~{N}-(cyclobutylmethyl)-1,3-dimethyl-pyrazole-4-carboxamide
著者Dunnett, L, Prischi, F.
登録日2024-04-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
9F4M
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UP1 in complex with Z1401276297
分子名称: (5~{R})-7-pyrazin-2-yl-2-oxa-7-azaspiro[4.4]nonane, Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed
著者Dunnett, L, Prischi, F.
登録日2024-04-28
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
9F4O
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UP1 in complex with Z991506900
分子名称: (3~{R})-3-methyl-1-(6-methylpyridin-2-yl)piperazine, Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed
著者Dunnett, L, Prischi, F.
登録日2024-04-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
9F4Q
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UP1 in complex with Z641239276
分子名称: 5-(2-phenylethylamino)pyrimidine-2,4-diol, Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed
著者Dunnett, L, Prischi, F.
登録日2024-04-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published

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件を2024-09-11に公開中

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