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PDB形式変換不可の PDB エントリー
8RRQ
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Crystal structure of human SYK in complex with compound 24
分子名称: GLYCEROL, N-[(1S,2R)-2-azanylcyclohexyl]-5-[2-[(3,5-dimethylphenyl)amino]pyrimidin-4-yl]-2-methyl-pyrazole-3-carboxamide, Tyrosine-protein kinase SYK
著者Canevari, G.
登録日2024-01-23
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery and optimization of 4-pyrazolyl-2-aminopyrimidine derivatives as potent spleen tyrosine kinase (SYK) inhibitors.
Eur.J.Med.Chem., 270, 2024
8RRS
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Structure of mouse RyR2 solubilised in detergent in open state in complex with Ca2+, ATP, caffeine and Nb9657.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Li, C, Efremov, R.G.
登録日2024-01-23
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
J.Biol.Chem., 2024
8RRT
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Structure of rabbit RyR1 reconstituted into lipid liposomes in open state in complex with FKBP and Nb9657
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Li, C, Efremov, R.G.
登録日2024-01-23
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
J.Biol.Chem., 2024
8RRU
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BU of 8rru by Molmil
Structure of RyR1 reconstituted into lipid liposomes in primed state in complex with FKBP and Nb9657.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Li, C, Efremov, R.G.
登録日2024-01-23
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
J.Biol.Chem., 2024
8RRV
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BU of 8rrv by Molmil
Structure of RyR1 in detergent in close state in complex with FKBP and Nb9657.
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ZINC ION, ...
著者Li, C, Efremov, R.G.
登録日2024-01-23
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
J.Biol.Chem., 2024
8RRW
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Structure of RyR1 in detergent in open state in complex with FKBP and Nb9657.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Li, C, Efremov, R.G.
登録日2024-01-23
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
J.Biol.Chem., 2024
8RRX
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Structure of RyR1 reconstituted into lipid nanodisc in primed state in complex with Ca2+, ATP, caffeine and Nb9657
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
著者Li, C, Efremov, R.G.
登録日2024-01-23
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
J.Biol.Chem., 2024
8RRZ
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Crystal structure of SYK kinase in complex with compound 1
分子名称: GLYCEROL, N-[(2S)-1-(azetidin-1-yl)propan-2-yl]-3-{2-[(3,5-dimethoxyphenyl)amino]pyrimidin-4-yl}-1-methyl-1H-pyrazole-5-carboxamide, Tyrosine-protein kinase SYK
著者Canevari, G.
登録日2024-01-24
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery and optimization of 4-pyrazolyl-2-aminopyrimidine derivatives as potent spleen tyrosine kinase (SYK) inhibitors.
Eur.J.Med.Chem., 270, 2024
8RS0
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BU of 8rs0 by Molmil
Structure of RyR1 in detergent in primed state in complex with nanobody and FKBP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Li, C, Efremov, R.G.
登録日2024-01-24
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
J.Biol.Chem., 2024
8RSK
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Crystal structure of Methanobrevibacter oralis macrodomain in complex with Asn-ADPr
分子名称: (2~{S})-4-[[(2~{S},3~{R},4~{S},5~{R})-5-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]amino]-2-azanyl-4-oxidanylidene-butanoic acid, ACETATE ION, GLYCEROL, ...
著者Ariza, A.
登録日2024-01-24
公開日2024-09-25
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.359 Å)
主引用文献Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains.
J.Biol.Chem., 2024
8RST
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BU of 8rst by Molmil
Rap from bacteriophage Phi3T in presence of pheromone SRGHTS
分子名称: Glycerol ethoxylate, Rap3T, SRGHTS, ...
著者Felipe-Ruiz, A, Zamora-Caballero, S, Marina, A.
登録日2024-01-25
公開日2024-07-24
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Extracellular proteolysis of tandemly duplicated pheromone propeptides affords additional complexity to bacterial quorum sensing.
Plos Biol., 22, 2024
8RSU
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Rap from bacteriophage Phi3T in presence of pheromone RRGHTA
分子名称: Glycerol ethoxylate, Pheromone RRGHTA, Rap3T
著者Felipe-Ruiz, A, Zamora-Caballero, S, Marina, A.
登録日2024-01-25
公開日2024-07-24
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Extracellular proteolysis of tandemly duplicated pheromone propeptides affords additional complexity to bacterial quorum sensing.
Plos Biol., 22, 2024
8RSV
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Rap from bacteriophage Phi3T in presence of pheromone RRGHTAS
分子名称: Glycerol ethoxylate, Pheromone RRGHTAS, Rap3T
著者Felipe-Ruiz, A, Zamora-Caballero, S, Marina, A.
登録日2024-01-25
公開日2024-07-24
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Extracellular proteolysis of tandemly duplicated pheromone propeptides affords additional complexity to bacterial quorum sensing.
Plos Biol., 22, 2024
8RTC
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BU of 8rtc by Molmil
Rap from bacteriophage Phi3T in presence of pheromone RGHTS
分子名称: Glycerol ethoxylate, Pheromone RGHTS, Rap3T
著者Felipe-Ruiz, A, Zamora-Caballero, S, Marina, A.
登録日2024-01-25
公開日2024-07-24
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Extracellular proteolysis of tandemly duplicated pheromone propeptides affords additional complexity to bacterial quorum sensing.
Plos Biol., 22, 2024
8RTY
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BU of 8rty by Molmil
Structure of the F-actin barbed end bound by Cdc12 and profilin (ring complex) at a resolution of 6.3 Angstrom
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
著者Oosterheert, W, Boiero Sanders, M, Funk, J, Prumbaum, D, Raunser, S, Bieling, P.
登録日2024-01-29
公開日2024-04-10
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (6.25 Å)
主引用文献Molecular mechanism of actin filament elongation by formins.
Science, 384, 2024
8RTZ
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The structure of E. coli penicillin binding protein 3 (PBP3) in complex with a bicyclic peptide inhibitor
分子名称: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Bicyclic peptide inhibitor, Peptidoglycan D,D-transpeptidase FtsI
著者Newman, H, Rowland, C.E, Dods, R, Lewis, N, Stanway, S.J, Bellini, D, Beswick, P.
登録日2024-01-29
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Discovery and chemical optimisation of a Potent, Bi-cyclic (Bicycle) Antimicrobial Inhibitor of Escherichia coli PBP3
To Be Published
8RUY
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Structure of IFTA and IFTB in Retrograde Intraflagellar transport trains
分子名称: Clusterin-associated protein 1, IFT54, IFT70, ...
著者Lacey, S, Pigino, G.
登録日2024-01-31
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (15.4 Å)
主引用文献Retrograde intraflagellar transport trains are a unique polymeric arrangement of IFT complexes
To Be Published
8RV4
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BU of 8rv4 by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 2
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-2-phenyl-benzoic acid, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RV6
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BU of 8rv6 by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 2
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-(4-hydroxyphenyl)benzoic acid, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RV7
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BU of 8rv7 by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 4
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-(3-oxidanylprop-1-ynyl)benzoic acid, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RV8
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BU of 8rv8 by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 5
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]-2-chloranyl-benzoic acid, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RV9
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BU of 8rv9 by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 6
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-2-chloranyl-benzoic acid, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RVA
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BU of 8rva by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 7
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]benzoic acid, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RVB
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BU of 8rvb by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 8
分子名称: (2~{R},3~{R},4~{S},5~{S})-2-(6-aminopurin-9-yl)-5-[2-(1~{H}-1,2,3-triazol-4-yl)ethylsulfanylmethyl]oxolane-3,4-diol, 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RVE
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BU of 8rve by Molmil
Vimentin intermediate filament
分子名称: Vimentin
著者Eibauer, M, Medalia, O.
登録日2024-02-01
公開日2024-04-10
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Vimentin filaments integrate low-complexity domains in a complex helical structure.
Nat.Struct.Mol.Biol., 31, 2024

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件を2024-10-09に公開中

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