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PDB形式変換不可の PDB エントリー
8B3O
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CryoEM structure of the pointy tip (proteins pIII/pVI/pVIII) from the f1 filamentous bacteriophage
分子名称: Attachment protein G3P, Capsid protein G8P, Head virion protein G6P
著者Conners, R, McLaren, M, Gold, V.A.M.
登録日2022-09-16
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Cryo-electron microscopy of the f1 filamentous phage reveals insights into viral infection and assembly.
Nat Commun, 14, 2023
8B3P
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CryoEM structure of the round tip (proteins pVII/pVIII/pIX) from the f1 filamentous bacteriophage
分子名称: Capsid protein G8P, Tail virion protein G7P, Tail virion protein G9P
著者Conners, R, McLaren, M, Gold, V.A.M.
登録日2022-09-16
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Cryo-electron microscopy of the f1 filamentous phage reveals insights into viral infection and assembly.
Nat Commun, 14, 2023
8B3Q
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CryoEM structure of the central filamentous region of the f1 filamentous bacteriophage, consisting of the major capsid protein pVIII
分子名称: Capsid protein G8P
著者Conners, R, McLaren, M, Gold, V.A.M.
登録日2022-09-16
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Cryo-electron microscopy of the f1 filamentous phage reveals insights into viral infection and assembly.
Nat Commun, 14, 2023
8B42
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Structure of heteromeric LRRC8A/C Volume-Regulated Anion Channel.
分子名称: Volume-regulated anion channel subunit LRRC8A, Volume-regulated anion channel subunit LRRC8C
著者Sawicka, M, Dutzler, R.
登録日2022-09-19
公開日2022-12-14
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Structure of a volume-regulated heteromeric LRRC8A/C channel.
Nat.Struct.Mol.Biol., 30, 2023
8B4G
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Structure of a fungal LPMO bound to ligands
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACRYLIC ACID, CHLORIDE ION, ...
著者Banerjee, S, Huang, Z, Brander, S, Johansen, K.S, Lo Leggio, L.
登録日2022-09-20
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.496 Å)
主引用文献Structure of a fungal LPMO bound to ligands
To Be Published
8B4N
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X-ray structure of phycoerythrin from Porphyridium cruentum
分子名称: B-phycoerythrin alpha chain, B-phycoerythrin beta chain, N-METHYL ASPARAGINE, ...
著者Merlino, A, Ferraro, G.
登録日2022-09-20
公開日2023-02-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Inside out Porphyridium cruentum : Beyond the Conventional Biorefinery Concept.
Acs Sustain Chem Eng, 11, 2023
8B5G
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C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 7,8-dimethoxy-3-methyl-1,3-dihydro-2H-benzo[d]azepin-2-one
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7,8-dimethoxy-3-methyl-1~{H}-3-benzazepin-2-one, ...
著者Chung, C.
登録日2022-09-22
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.619 Å)
主引用文献Identification and Optimization of a Ligand-Efficient Benzoazepinone Bromodomain and Extra Terminal (BET) Family Acetyl-Lysine Mimetic into the Oral Candidate Quality Molecule I-BET432.
J.Med.Chem., 65, 2022
8B5H
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C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (R)-7-((R)-1,2-dihydroxyethyl)-1,3-dimethyl-5-(1-methyl-1H-pyrazol-4-yl)-1,3-dihydro-2H-benzo[d]azepin-2-one
分子名称: (1~{R})-7-[(1~{R})-1,2-bis(oxidanyl)ethyl]-1,3-dimethyl-5-(1-methylpyrazol-4-yl)-1~{H}-3-benzazepin-2-one, 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, ...
著者Chung, C.
登録日2022-09-22
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Identification and Optimization of a Ligand-Efficient Benzoazepinone Bromodomain and Extra Terminal (BET) Family Acetyl-Lysine Mimetic into the Oral Candidate Quality Molecule I-BET432.
J.Med.Chem., 65, 2022
8B5I
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C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 7,8-dimethoxy-1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one
分子名称: (1~{R})-7,8-dimethoxy-1,3-dimethyl-1~{H}-3-benzazepin-2-one, 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
著者Chung, C.
登録日2022-09-22
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.604 Å)
主引用文献Identification and Optimization of a Ligand-Efficient Benzoazepinone Bromodomain and Extra Terminal (BET) Family Acetyl-Lysine Mimetic into the Oral Candidate Quality Molecule I-BET432.
J.Med.Chem., 65, 2022
8B5J
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C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 7,8-dimethoxy-1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one
分子名称: (5~{R})-7,8-dimethoxy-3,5-dimethyl-2,5-dihydro-1~{H}-3-benzazepin-4-one, 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
著者Chung, C.
登録日2022-09-22
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Identification and Optimization of a Ligand-Efficient Benzoazepinone Bromodomain and Extra Terminal (BET) Family Acetyl-Lysine Mimetic into the Oral Candidate Quality Molecule I-BET432.
J.Med.Chem., 65, 2022
8B5L
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Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Pauwels, E, Shewakramani, N.R, De Wijngaert, B, Vermeire, K, Das, K.
登録日2022-09-23
公開日2023-03-01
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Structural insights into TRAP association with ribosome-Sec61 complex and translocon inhibition by a CADA derivative.
Sci Adv, 9, 2023
8B6C
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Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
分子名称: 28S rRNA, 4-[[9-(cyclohexylmethyl)-3-methylidene-5-(4-methylphenyl)sulfonyl-1,5,9-triazacyclododec-1-yl]sulfonyl]-~{N},~{N}-dimethyl-aniline, 5.8S rRNA, ...
著者Pauwels, E, Shewakramani, N.R, De Wijngaert, B, Vermeire, K, Das, K.
登録日2022-09-26
公開日2023-02-22
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Structural insights into TRAP association with ribosome-Sec61 complex and translocon inhibition by a CADA derivative.
Sci Adv, 9, 2023
8B6F
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Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
著者Muhleip, A, Kock Flygaard, R, Amunts, A.
登録日2022-09-27
公開日2023-03-29
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8B6G
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Cryo-EM structure of succinate dehydrogenase complex (complex-II) in respiratory supercomplex of Tetrahymena thermophila
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, ...
著者Muhleip, A, Kock Flygaard, R, Baradaran, R, Amunts, A.
登録日2022-09-27
公開日2023-03-29
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8B6H
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Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ...
著者Muhleip, A, Kock Flygaard, R, Amunts, A.
登録日2022-09-27
公開日2023-03-29
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8B6V
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Mp2Ba1 pre-pore
分子名称: MAGNESIUM ION, Mpf2Ba1
著者Marini, G, Poland, B, Leininger, C, Lukoyanova, N, Spielbauer, D, Barry, J, Altier, D, Lum, A, Scolaro, E, Perez Ortega, C, Yalpani, N, Sandahl, G, Mabry, T, Klever, J, Nowatzki, T, Zhao, J.Z, Sethi, A, Kassa, A, Crane, V, Lu, A, Nelson, M.E, Eswar, N, Topf, M, Saibil, H.R.
登録日2022-09-27
公開日2023-05-31
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural journey of an insecticidal protein against western corn rootworm.
Nat Commun, 14, 2023
8B6W
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Mpf2Ba1 pore
分子名称: MAGNESIUM ION, Mpf2Ba1
著者Marini, G, Poland, B, Leininger, C, Lukoyanova, N, Spielbauer, D, Barry, J, Altier, D, Lum, A, Scolaro, E, Perez Ortega, C, Yalpani, N, Sandahl, G, Mabry, T, Klever, J, Nowatzki, T, Zhao, J.Z, Sethi, A, Kassa, A, Crane, V, Lu, A, Nelson, M.E, Eswar, N, Topf, M, Saibil, H.R.
登録日2022-09-27
公開日2023-05-31
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural journey of an insecticidal protein against western corn rootworm.
Nat Commun, 14, 2023
8B7L
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X-ray structure of Auranofin-horse spleen ferritin
分子名称: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
著者Ferraro, G, Merlino, A.
登録日2022-09-30
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Evaluation of Auranofin Loading within Ferritin Nanocages.
Int J Mol Sci, 23, 2022
8B7O
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X-ray structure of Auranofin-human H-chain ferritin
分子名称: CHLORIDE ION, FE (III) ION, Ferritin heavy chain, ...
著者Ferraro, G, Merlino, A.
登録日2022-09-30
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Evaluation of Auranofin Loading within Ferritin Nanocages.
Int J Mol Sci, 23, 2022
8B7P
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Crystal structure of an AA9 LPMO from Aspergillus nidulans, AnLPMOC
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Endo-beta-1,4-glucanase D
著者Males, A, Rafael Fanchini Terrasan, C, Davies, G.J, Walton, P.H.
登録日2022-09-30
公開日2023-10-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Characterisation of lytic polysaccharide monooxygenases from Aspergillus nidulans
To Be Published
8B7Y
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Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Koller, T.O, Graf, M, Wilson, D.N.
登録日2022-10-03
公開日2023-01-25
最終更新日2023-02-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The Myxobacterial Antibiotic Myxovalargin: Biosynthesis, Structural Revision, Total Synthesis, and Molecular Characterization of Ribosomal Inhibition.
J.Am.Chem.Soc., 145, 2023
8B9A
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S. cerevisiae replisome + Ctf4, bound by pol alpha primase. Complex engaged with a fork DNA substrate containing a 60 nucleotide lagging strand.
分子名称: Cell division control protein 45, Chromosome segregation in meiosis protein 3, DNA polymerase alpha catalytic subunit A, ...
著者Jones, M.L, Yeeles, J.T.P.
登録日2022-10-05
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献How Pol alpha-primase is targeted to replisomes to prime eukaryotic DNA replication.
Mol.Cell, 83, 2023
8B9B
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S. cerevisiae replisome + Ctf4, bound by pol alpha. Complex engaged with a fork DNA substrate containing a 60 nucleotide lagging strand.
分子名称: Cell division control protein 45, Chromosome segregation in meiosis protein 3, DNA polymerase alpha catalytic subunit A, ...
著者Jones, M.L, Yeeles, J.T.P.
登録日2022-10-05
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献How Pol alpha-primase is targeted to replisomes to prime eukaryotic DNA replication.
Mol.Cell, 83, 2023
8B9C
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S. cerevisiae pol alpha - replisome complex
分子名称: Cell division control protein 45, Chromosome segregation in meiosis protein 3, DNA polymerase alpha catalytic subunit A, ...
著者Jones, M.L, Yeeles, J.T.P.
登録日2022-10-05
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献How Pol alpha-primase is targeted to replisomes to prime eukaryotic DNA replication.
Mol.Cell, 83, 2023
8B9D
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Human replisome bound by Pol Alpha
分子名称: Cell division control protein 45 homolog, Claspin, DNA Molecule, ...
著者Jones, M.L, Yeeles, J.T.P.
登録日2022-10-05
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献How Pol alpha-primase is targeted to replisomes to prime eukaryotic DNA replication.
Mol.Cell, 83, 2023

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