PDB形式変換不可の PDB エントリー

7NMU	Crystal structure of human platelet glycoprotein VI in complex with an inhibitory nanobody. 分子名称: CALCIUM ION, Nanobody 2, Platelet glycoprotein VI 著者 Slater, A, Jonas, E, Watson, S.P. 登録日 2021-02-23 公開日 2021-03-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural characterization of a novel GPVI-nanobody complex reveals a biologically active domain-swapped GPVI dimer. Blood, 137, 2021
7NMV	Crystal structure of beta-2-microglobulin D76Q mutant 分子名称: Beta-2-microglobulin 著者 Guthertz, N. 登録日 2021-02-23 公開日 2022-08-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 The effect of mutation on an aggregation-prone protein: An in vivo, in vitro, and in silico analysis. Proc.Natl.Acad.Sci.USA, 119, 2022
7NMY	Crystal structure of beta-2-microglobulin D76Y mutant 分子名称: Beta-2-microglobulin 著者 Guthertz, N. 登録日 2021-02-23 公開日 2022-08-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 The effect of mutation on an aggregation-prone protein: An in vivo, in vitro, and in silico analysis. Proc.Natl.Acad.Sci.USA, 119, 2022
7NMZ	Structure of 14-3-3 eta in complex with Nedd4-2(335-455) containing two 14-3-3 binding motifs Ser342 and Ser448 分子名称: 14-3-3 protein eta, E3 ubiquitin-protein ligase NEDD4-like 著者 Pohl, P, Obsil, T, Obsilova, V. 登録日 2021-02-23 公開日 2021-07-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.303 Å) 主引用文献 14-3-3-protein regulates Nedd4-2 by modulating interactions between HECT and WW domains. Commun Biol, 4, 2021
7NN5	Crystal structure of beta-2-microglobulin D76K mutant 分子名称: Beta-2-microglobulin 著者 Guthertz, N. 登録日 2021-02-24 公開日 2022-08-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.242 Å) 主引用文献 The effect of mutation on an aggregation-prone protein: An in vivo, in vitro, and in silico analysis. Proc.Natl.Acad.Sci.USA, 119, 2022
7NP7	Structure of an intact ESX-5 inner membrane complex, Composite C1 model 分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5, ... 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-26 公開日 2021-06-02 実験手法 ELECTRON MICROSCOPY (4.03 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
7NPM	X-ray structure of the adduct formed upon reaction of oxaliplatin with human angiogenin 分子名称: Angiogenin, D(-)-TARTARIC ACID, PLATINUM (II) ION 著者 Ferraro, G, Merlino, A. 登録日 2021-02-27 公開日 2022-03-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Oxaliplatin inhibits angiogenin proliferative and cell migration effects in prostate cancer cells. J.Inorg.Biochem., 226, 2022
7NPN	B-brick bare in 5 mM Mg2+ 分子名称: SCAFFOLD STRAND, STAPLE STRAND 著者 Bertosin, E, Stoemmer, P, Feigl, E, Wenig, M, Honemann, M, Dietz, H. 登録日 2021-02-27 公開日 2021-03-31 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (10.38 Å) 主引用文献 Cryo-Electron Microscopy and Mass Analysis of Oligolysine-Coated DNA Nanostructures. Acs Nano, 15, 2021
7NPR	Structure of an intact ESX-5 inner membrane complex, Composite C3 model 分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5, ... 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-06-02 実験手法 ELECTRON MICROSCOPY (3.82 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
7NPS	Structure of the periplasmic assembly from the ESX-5 inner membrane complex, C1 model 分子名称: ESX-5 secretion system ATPase EccB5, Mycosin-5 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-05-26 最終更新日 2023-11-29 実験手法 ELECTRON MICROSCOPY (3.81 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
7NPT	Cytosolic bridge of an intact ESX-5 inner membrane complex 分子名称: ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-05-26 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.27 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
7NPU	MycP5-free ESX-5 inner membrane complex, state I 分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-06-02 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (4.48 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
7NPV	MycP5-free ESX-5 inner membrane complex, State II 分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-06-02 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (6.66 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
7NPY	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 6-benzyl-N2-methyl-N4-((1S,2S)-2-methylcyclopropyl)pyridine-2,4-dicarboxamide 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, ~{N}2-methyl-~{N}4-[(1~{S},2~{S})-2-methylcyclopropyl]-6-(phenylmethyl)pyridine-2,4-dicarboxamide 著者 Chung, C. 登録日 2021-02-28 公開日 2021-07-21 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.601 Å) 主引用文献 Identification of a Series of N -Methylpyridine-2-carboxamides as Potent and Selective Inhibitors of the Second Bromodomain (BD2) of the Bromo and Extra Terminal Domain (BET) Proteins. J.Med.Chem., 64, 2021
7NPZ	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (R)-N5-cyclopropyl-N3-methyl-2-oxo-1-(1-phenylethyl)-1,2-dihydropyridine-3,5-dicarboxamide 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, ~{N}5-cyclopropyl-~{N}3-methyl-2-oxidanylidene-1-[(1~{R})-1-phenylethyl]pyridine-3,5-dicarboxamide 著者 Chung, C. 登録日 2021-02-28 公開日 2021-07-21 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 Identification of a Series of N -Methylpyridine-2-carboxamides as Potent and Selective Inhibitors of the Second Bromodomain (BD2) of the Bromo and Extra Terminal Domain (BET) Proteins. J.Med.Chem., 64, 2021
7NQ0	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH oxabicyclo(hexan-6-yl)-N2-methyl-6-((S)-1-phenylethyl)pyridine-2,4-dicarboxamide 分子名称: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Bromodomain-containing protein 2, ... 著者 Chung, C. 登録日 2021-02-28 公開日 2021-07-21 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Identification of a Series of N -Methylpyridine-2-carboxamides as Potent and Selective Inhibitors of the Second Bromodomain (BD2) of the Bromo and Extra Terminal Domain (BET) Proteins. J.Med.Chem., 64, 2021
7NQ1	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 6-((S)-hydroxy(phenyl)methyl)-N2-methyl-N4-((1S,2S)-2-methylcyclopropyl)pyridine-2,4-dicarboxamide 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, ~{N}2-methyl-~{N}4-[(1~{S},2~{S})-2-methylcyclopropyl]-6-[(~{S})-oxidanyl(phenyl)methyl]pyridine-2,4-dicarboxamide 著者 Chung, C. 登録日 2021-02-28 公開日 2021-07-21 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Identification of a Series of N -Methylpyridine-2-carboxamides as Potent and Selective Inhibitors of the Second Bromodomain (BD2) of the Bromo and Extra Terminal Domain (BET) Proteins. J.Med.Chem., 64, 2021
7NQ2	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (S)-N4-cyclopropyl-N2-methyl-6-(1-phenylethyl)pyridine-2,4-dicarboxamide 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, ~{N}4-cyclopropyl-~{N}2-methyl-6-[(1~{S})-1-phenylethyl]pyridine-2,4-dicarboxamide 著者 Chung, C. 登録日 2021-02-28 公開日 2021-07-21 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.735 Å) 主引用文献 Identification of a Series of N -Methylpyridine-2-carboxamides as Potent and Selective Inhibitors of the Second Bromodomain (BD2) of the Bromo and Extra Terminal Domain (BET) Proteins. J.Med.Chem., 64, 2021
7NQ3	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N4-((1R,5S,6r)-3-oxabicyclo[3.1.0]hexan-6-yl)-6-((S)-methoxy(phenyl)methyl)-N2-methylpyridine-2,4-dicarboxamide 分子名称: 1,2-ETHANEDIOL, 6-[(~{S})-methoxy(phenyl)methyl]-~{N}2-methyl-~{N}4-[(1~{S},5~{R})-3-oxabicyclo[3.1.0]hexan-6-yl]pyridine-2,4-dicarboxamide, Bromodomain-containing protein 2 著者 Chung, C. 登録日 2021-02-28 公開日 2021-07-21 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.603 Å) 主引用文献 Identification of a Series of N -Methylpyridine-2-carboxamides as Potent and Selective Inhibitors of the Second Bromodomain (BD2) of the Bromo and Extra Terminal Domain (BET) Proteins. J.Med.Chem., 64, 2021
7NQ5	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 3-(2-(benzyloxy)phenyl)-5-methyl-1H-1,2,4-triazole 分子名称: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-methyl-5-(2-phenylmethoxyphenyl)-4~{H}-1,2,4-triazole, ... 著者 Chung, C. 登録日 2021-03-01 公開日 2021-03-24 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Template-Hopping Approach Leads to Potent, Selective, and Highly Soluble Bromo and Extraterminal Domain (BET) Second Bromodomain (BD2) Inhibitors. J.Med.Chem., 64, 2021
7NQ7	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (S)-N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(1-phenylethoxy)benzamide 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, ~{N}-ethyl-3-(1-methyl-1,2,3-triazol-4-yl)-4-[(1~{S})-1-phenylethoxy]benzamide 著者 Chung, C. 登録日 2021-03-01 公開日 2021-03-24 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Template-Hopping Approach Leads to Potent, Selective, and Highly Soluble Bromo and Extraterminal Domain (BET) Second Bromodomain (BD2) Inhibitors. J.Med.Chem., 64, 2021
7NQ9	C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 2-benzyl-N-cyclopropyl-6-(1-methyl-1H-1,2,3-triazol-4-yl)isonicotinamide 分子名称: 1,2-ETHANEDIOL, 6-benzyl-N4-((1r,3r)-3-hydroxycyclobutyl)-N2-methylpyridine-2,4-dicarboxamide, Bromodomain-containing protein 2 著者 Chung, C.W. 登録日 2021-03-01 公開日 2021-03-24 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.602 Å) 主引用文献 Template-Hopping Approach Leads to Potent, Selective, and Highly Soluble Bromo and Extraterminal Domain (BET) Second Bromodomain (BD2) Inhibitors. J.Med.Chem., 64, 2021
7NQB	X.ray structure of the oxaliplatin/beta-lactoglobulin adduct 分子名称: Beta-lactoglobulin, PLATINUM (II) ION 著者 Merlino, A, Loreto, D, Ferraro, G. 登録日 2021-03-01 公開日 2022-03-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Protein-Based Delivery Systems for Anticancer Metallodrugs: Structure and Biological Activity of the Oxaliplatin/ beta-Lactoglobulin Adduct. Pharmaceuticals, 15, 2022
7NQG	The structure of the SBP TarP_Rhp in complex with 4-hydroxyphenylacetate 分子名称: 1,2-ETHANEDIOL, 4-HYDROXYPHENYLACETATE, PHOSPHATE ION, ... 著者 Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J. 登録日 2021-03-01 公開日 2021-10-06 最終更新日 2022-01-26 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters. Febs J., 289, 2022
7NQH	55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet 分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S16, ... 著者 Kummer, E, Schubert, K, Ban, N. 登録日 2021-03-01 公開日 2021-05-05 最終更新日 2021-12-15 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of translation termination, rescue, and recycling in mammalian mitochondria. Mol.Cell, 81, 2021

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