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Structure paper

TitleIncreasing the structural coverage of tuberculosis drug targets.
Journal, issue, pagesTuberculosis (Edinb), Vol. 95, Page 142-148, Year 2015
Publish dateMar 30, 2009 (structure data deposition date)
AuthorsBaugh, L. / Phan, I. / Begley, D.W. / Clifton, M.C. / Armour, B. / Dranow, D.M. / Taylor, B.M. / Muruthi, M.M. / Abendroth, J. / Fairman, J.W. ...Baugh, L. / Phan, I. / Begley, D.W. / Clifton, M.C. / Armour, B. / Dranow, D.M. / Taylor, B.M. / Muruthi, M.M. / Abendroth, J. / Fairman, J.W. / Fox, D. / Dieterich, S.H. / Staker, B.L. / Gardberg, A.S. / Choi, R. / Hewitt, S.N. / Napuli, A.J. / Myers, J. / Barrett, L.K. / Zhang, Y. / Ferrell, M. / Mundt, E. / Thompkins, K. / Tran, N. / Lyons-Abbott, S. / Abramov, A. / Sekar, A. / Serbzhinskiy, D. / Lorimer, D. / Buchko, G.W. / Stacy, R. / Stewart, L.J. / Edwards, T.E. / Van Voorhis, W.C. / Myler, P.J.
External linksTuberculosis (Edinb) / PubMed:25613812
MethodsX-ray diffraction
Resolution1.25 - 2.65 Å
Structure data

PDB-3gvc:
Crystal structure of probable short-chain dehydrogenase-reductase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-3gvg:
Crystal structure of Triosephosphate isomerase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-3gwc:
Crystal structure of Mycobacterium tuberculosis thymidylate synthase X bound to FdUMP and FAD
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3h7f:
Crystal structure of serine hydroxymethyltransferase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3h81:
Crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3he2:
Crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3hwi:
Crystal structure of probable thiosulfate sulfurtransferase Cysa2 (Rhodanese-like protein) from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.29 Å

PDB-3hwk:
Crystal structure of methylcitrate synthase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3hzg:
Crystal structure of mycobacterium tuberculosis thymidylate synthase X bound with FAD
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-3ico:
Crystal structure of 6-phosphogluconolactonase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-3khp:
Crystal structure of a possible dehydrogenase from Mycobacterium tuberculosis at 2.3A resolution
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3lls:
Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3moy:
Crystal structure of probable enoyl-CoA hydratase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3mpz:
Crystal structure of CYTIDINE DEAMINASE from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3myb:
Crystal structure of enoyl-coa hydratase mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-3ndn:
Crystal structure of O-succinylhomoserine sulfhydrylase from Mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3ndo:
Crystal structure of deoxyribose phosphate aldolase from mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-3nf4:
Crystal structure of acyl-CoA dehydrogenase from Mycobacterium thermoresistibile bound to flavin adenine dinucleotide
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-3ng3:
Crystal structure of deoxyribose phosphate aldolase from mycobacterium avium 104 in a schiff base with an unknown aldehyde
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-3njd:
Crystal structure of enoyl-coa hydratase from mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-3nwo:
Crystal structure of Proline iminopeptidase Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3o0m:
Crystal structure of a ZN-bound histidine triad family protein from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3o38:
Crystal structure of a short chain dehydrogenase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3oc6:
Crystal structure of 6-phosphogluconolactonase from mycobacterium smegmatis, apo form
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3oc7:
Crystal structure of an enoyl-CoA hydratase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3oi9:
Crystal structure of molybdenum cofactor synthesis domain from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3oks:
Crystal structure of 4-aminobutyrate transaminase from mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3ome:
Crystal structure of a probable ENOYL-COA Hydratase from Mycobacterium Smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-3p0t:
Crystal structure of an HIT-like protein from mycobacterium paratuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3p2y:
Crystal structure of alanine dehydrogenase/pyridine nucleotide transhydrogenase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.82 Å

PDB-3p4i:
Crystal structure of acetate kinase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-3p4t:
Crystal structure of a putative acyl-CoA dehydrogenase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3p5m:
Crystal structure of an enoyl-CoA hydratase/isomerase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-3p85:
Crystal structure enoyl-coa hydratase from mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3pe8:
Crystal structure of Enoyl-CoA hydratase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-3pk0:
Crystal structure of Short-chain dehydrogenase/reductase SDR from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-3ppi:
Crystal structure of 3-hydroxyacyl-CoA dehydrogenase type-2 from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3pzy:
Crystal structure of Molybdopterin biosynthesis mog protein from Mycobacterium paratuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3q1t:
Crystal structure of enoyl-coA hydratase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-3q8n:
Crystal structure of 4-aminobutyrate transaminase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-3qbp:
Crystal structure of fumarase Fum from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3qdf:
Crystal structure of 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-3qha:
Crystal structure of a Putative oxidoreductase from Mycobacterium avium 104
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-3qiv:
Crystal structure of a putative short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier-protein] reductase from Mycobacterium paratuberculosis ATCC BAA-968 / K-10
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-3qk8:
Crystal structure of enoyl-coA hydratase EchA15 from Mycobacterium marinum in complex with an unknown ligand
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-3qka:
Crystal structure of enoyl-CoA hydratase EchA5 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-3qlj:
Crystal structure of a short chain dehydrogenase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3qmj:
Crystal structure of Enoyl-CoA hydratase EchA8_6 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3qre:
Crystal structure of an enoyl-coA hydratase EchA12_1 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3qua:
Crystal structure of a putative uncharacterized protein and possible Molybdenum cofactor protein from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3quv:
Crystal structure of a tRNA-guanine-N1-methyltransferase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3qxi:
Crystal structure of enoyl-CoA hydratase EchA1 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3qxz:
Crystal structure of a probable enoyl-CoA hydratase/isomerase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 1.35 Å

PDB-3qyr:
Crystal structure of enoyl-coA hydratase EchA16_2 Mycobacterium paratuberculosis ATCC BAA-968 / K-10
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-3r0o:
Crystal structure of carnitinyl-CoA hydratase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3r1i:
Crystal structure of a short-chain type dehydrogenase/reductase from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3r1j:
Crystal structure of Alpha-ketoglutarate-dependent taurine dioxygenase from Mycobacterium avium, native form
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-3r20:
Crystal structure of cytidylate kinase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3r2n:
Crystal structure of cytidine deaminase from Mycobacterium leprae
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3r4t:
Crystal structure of 4-aminobutyrate aminotransferase GabT from Mycobacterium marinum covalently bound to pyridoxal phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3r6h:
Crystal structure of an enoyl-CoA hydratase (ECHA3) from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-3r6o:
Crystal structure of a probable 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3r7k:
Crystal structure of a probable acyl CoA dehydrogenase from Mycobacterium abscessus ATCC 19977 / DSM 44196
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3r8c:
Crystal structure of cytidylate kinase (Cmk) from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3r9p:
Crystal structure of AckA from Mycobacterium paratuberculosis ATCC BAA-968 / K-10
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3r9q:
Structure of a probable enoyl-coa hydratase/isomerase from Mycobacterium abscessus ATCC 19977 / DSM 44196
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3r9r:
Structure of a Phosphoribosylaminoimidazole-succinocarboxamide synthase from Mycobacterium abscessus ATCC 19977 / DSM 44196
Method: X-RAY DIFFRACTION / Resolution: 1.849 Å

PDB-3r9s:
Structure of a carnitinyl-CoA dehydratase from Mycobacterium avium 104
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3r9t:
Structure of EchA1_1 from Mycobacterium paratuberculosis ATCC BAA-968 / K-10
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-3rd5:
Crystal structure of a putative uncharacterized protein from Mycobacterium Paratuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3rd7:
Crystal structure of acyl-coa thioesterase from mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3rd8:
Crystal structure of fumarate hydratase class II Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3rfq:
Crystal structure of Pterin-4-alpha-carbinolamine dehydratase MoaB2 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-3rih:
Crystal structure of a putative short chain dehydrogenase or reductase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-3rr2:
Structure of a Cysteine synthase (O-Acetylserine Sulfhydrylase (OASS)) from Mycobacterium marinum ATCC BAA-535 / M
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3rr6:
Structure of a putative uncharacterized protein from Mycobacterium abscessus ATCC 19977 / DSM 44196
Method: X-RAY DIFFRACTION / Resolution: 1.58 Å

PDB-3rrp:
Crystal structure of fumarate hydratase Fum from Mycobacterium abscessus with malate bound
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3rrv:
Crystal structure of an enoyl-CoA hydratase/isomerase from Mycobacterium paratuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-3rsi:
The structure of a putative enoyl-CoA hydratase/isomerase from Mycobacterium abscessus ATCC 19977 / DSM 44196
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3rv2:
Crystal structure of S-adenosylmethionine synthetase from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3s82:
Structure of a S-adenosylmethionine synthetase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 1.73 Å

PDB-3sbx:
Crystal structure of a putative uncharacterized protein from Mycobacterium marinum bound to adenosine 5'-monophosphate AMP
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3sf6:
Crystal structure of Glutaryl-CoA dehydrogenase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3sll:
Crystal structure of a probable enoyl-CoA hydratase/isomerase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-3svk:
Crystal structure of Acetyl-CoA acetyltransferase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3svt:
Structure of a short-chain type dehydrogenase/reductase from Mycobacterium ulcerans
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3swo:
Crystal structure of a glutaryl-coa dehydrogenase from mycobacterium smegmatis in complex with FADH2
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-3swt:
Crystal Structure of the Taurine catabolism dioxygenase, TauD from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-3swx:
Crystal structure of a probable enoyl-CoA hydratase/isomerase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3t3w:
Crystal structure of probable enoyl-COA hydratase from mycobacterium thermoresistibile
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3tav:
Crystal structure of a Methionine Aminopeptidase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-3tcr:
Crystal structure of a molybdopterin biosynthesis protein from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3tde:
Crystal structure of S-adenosylmethionine synthetase Rv1392 from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3tjr:
Crystal structure of a Rv0851c ortholog short chain dehydrogenase from Mycobacterium paratuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-3tl3:
Structure of a short-chain type dehydrogenase/reductase from Mycobacterium ulcerans
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3tlf:
Crystal structure of an enoyl-CoA hydratase/isomerase from Mycobacterium paratuberculosis
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-3trr:
Crystal structure of a probable enoyl-CoA hydratase/isomerase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 2.09 Å

PDB-3tx2:
Structure of a Probable 6-phosphogluconolactonase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3tzq:
Crystal structure of a short-chain type dehydrogenase/reductase from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3tzu:
Crystal structure of a glycine cleavage system H protein (GCVH) from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3u0a:
Crystal structure of an Acyl-CoA thioesterase II TesB2 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3u0b:
Crystal structure of an oxidoreductase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3ucx:
The structure of a Short chain dehydrogenase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3uve:
Crystal structure of Carveol dehydrogenase ((+)-trans-carveol dehydrogenase) from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-4di1:
Crystal structure of enoyl-CoA hydratase EchA17 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-4die:
Crystal structure of a cytidylate kinase CmK from Mycobacterium abscessus bound to cytidine-5'-monophosphate
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

PDB-4dq8:
Crystal structure of acetate kinase AckA from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-4dxl:
Crystal structure of IspE (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase) from Mycobacterium abscessus, bound to CMP and ATP
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4ed4:
Crystal structure of IspE (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase) from Mycobacterium abcessus, bound to ATP
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-4ege:
Crystal Structure of Dipeptidase PepE from Mycobacterium ulcerans
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-4egf:
Crystal structure of a L-xylulose reductase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4emd:
Crystal structure of IspE (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase) from Mycobacterium abcessus, bound to CMP and SO4
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-4eo9:
Crystal structure of a phosphoglycerate mutase gpm1 from Mycobacterium leprae
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-4eye:
Crystal structure of a probable oxidoreductase from Mycobacterium abscessus solved by iodide ion SAD
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4f3w:
Crystal structure of cytidine deaminase Cdd from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4f47:
The Structure of Enoyl-CoA hydratase EchA19 from Mycobacterium marinum
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-4ffc:
Crystal structure of a 4-aminobutyrate aminotransferase (GabT) from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4gk6:
X-ray crystal structure of a hypothetical deoxyuridine 5-triphosphate nucleotidohydrolase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4hdt:
Crystal structure of a Carnitinyl-CoA dehydratase from Mycobacterium thermoresistibile
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4hr3:
Structure of a putative acyl-CoA dehydrogenase from Mycobacterium abscessus
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4i1y:
The structure of Cysteine synthase from Mycobacterium ulcerans Agy99
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-4ijn:
Crystal structure of an acetate kinase from Mycobacterium smegmatis bound to AMP and sulfate
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4iv6:
X-ray crystal structure of an isovaleryl-CoA dehydrogenase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4iz9:
Crystal structure of an acetate kinase from Mycobacterium avium bound to an unknown acid-ApCpp conjugate and manganese
Method: X-RAY DIFFRACTION / Resolution: 1.98 Å

PDB-4j5i:
Crystal structure of an alpha-ketoglutarate-dependent taurine dioxygenase from Mycobacterium smegmatis
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-4kam:
X-ray crystal structure of O-acetylhomoserine sulfhydrylase MetC from Mycobacterium marinum ATCC BAA-535 / M
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4lgv:
X-ray crystal structure of Glucose-6-phosphate 1-dehydrogenase from Mycobacterium avium
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4o2d:
Crystal structure of aspartyl-tRNA synthetase from Mycobacterium smegmatis with bound aspartic acid
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-UFP:
5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE / inhibitor*YM

ChemComp-MG:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-SIN:
SUCCINIC ACID

ChemComp-PO4:
PHOSPHATE ION

ChemComp-SO4:
SULFATE ION

ChemComp-CL:
Unknown entry

ChemComp-TLA:
L(+)-TARTARIC ACID

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-NA:
Unknown entry

ChemComp-ZN:
Unknown entry

ChemComp-NH4:
AMMONIUM ION


ChemComp, No image

ChemComp-UNL:
Unknown ligand

ChemComp-ACT:
ACETATE ION

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-FMT:
FORMIC ACID

ChemComp-FAO:
[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-5-[(4aS,10aR)-7,8-dimethyl-2,4-dioxo-1,3,4,4a,5,10a-hexahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate

ChemComp-CAC:
CACODYLATE ION

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-SSN:
4-oxobutanoic acid

ChemComp-K:
Unknown entry

ChemComp-FE:
Unknown entry

ChemComp-DPO:
DIPHOSPHATE

ChemComp-FDA:
DIHYDROFLAVINE-ADENINE DINUCLEOTIDE

ChemComp-MRD:
(4R)-2-METHYLPENTANE-2,4-DIOL / precipitant*YM

ChemComp-BEZ:
BENZOIC ACID

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-B3P:
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-PG5:
1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE

ChemComp-UNX:
Unknown entry

ChemComp-LMR:
(2S)-2-hydroxybutanedioic acid

ChemComp-IOD:
IODIDE ION

ChemComp-MLT:
D-MALATE

ChemComp-PG0:
2-(2-METHOXYETHOXY)ETHANOL / inhibitor, precipitant*YM

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-C5P:
CYTIDINE-5'-MONOPHOSPHATE

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-MN:
Unknown entry

ChemComp-APC:
DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER / AMP-CPP, energy-carrying molecule analogue*YM

ChemComp-ASP:
ASPARTIC ACID

Source
  • mycobacterium tuberculosis (bacteria)
  • mycobacterium tuberculosis h37rv (bacteria)
  • mycobacterium smegmatis (bacteria)
  • mycobacterium thermoresistibile (bacteria)
  • mycobacterium avium (bacteria)
  • mycobacterium smegmatis str. mc2 155 (bacteria)
  • mycobacterium avium subsp. paratuberculosis (bacteria)
  • mycobacterium marinum (bacteria)
  • mycobacterium marinum m (bacteria)
  • mycobacterium abscessus (bacteria)
  • mycobacterium leprae (bacteria)
  • mycobacterium paratuberculosis (bacteria)
  • mycobacterium ulcerans (bacteria)
KeywordsOXIDOREDUCTASE / SSGCID / deCODE / NIAID / UWPPG / SBRI / Structural Genomics / Seattle Structural Genomics Center for Infectious Disease / ISOMERASE / TRIOSEPHOSPHATE ISOMERASE / MYCOBACTERIUM TUBERCULOSIS / Gluconeogenesis / Glycolysis / Pentose shunt / TRANSFERASE / ThyX / FAD / FdUMP / Flavoprotein / Methyltransferase / Nucleotide biosynthesis / serine hydroxymethyltransferase / One-carbon metabolism / Pyridoxal phosphate / LYASE / infectious disease / MPCS / Fatty acid metabolism / Lipid metabolism / enoyl-CoA hydratase / Seattle Structural Center for Infectious Disease / UW / tuberculosis / Tubercluosis / Acyltransferase / thymidylate synthase / HYDROLASE / dehydrogenase / EMERALD BIOSTRUCTURES / 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE / enoyl CoA / Actinobacteria / MYCOBACTERIUM SMEGMATIS / CYTIDINE DEAMINASE / mycobacterium / PLP / Schiff base / transamination / NIH / ALS COLLABORATIVE CRYSTALLOGRAPHY / DEOXYRIBOSEPHOSPHATE ALDOLASE / FADH / acyl-coA / ALS DEOXYRIBOSEPHOSPHATE ALDOLASE / MYCOBACTERIUM AVIUM 104 / MYCOBACERIUM SMEGMATIS / proline iminopeptidase / ortholog from a non-pathogenic species / Carboxylic Ester Hydrolase / non-pathogenic Mycobacterium species / ortholog / Johne's disease in cattle / paratuberculosis / Crohn's disease in humans / hydratase / crotonase / BIOSYNTHETIC PROTEIN / paratubercluosis / molybdenum cofactor / moco / UNKNOWN FUNCTION / HIT-LIKE PROTEIN / MYCOBACERIUM PARATUBERCULOSIS / non-pathogenic species / pyruvate / propanoate / acetyl-CoA biosynthesis / kinase / Acyl-CoA dehydrogenase / Coenzyme A / MYCOBACERIUM AVIUM / 3-hydroxyacyl-CoA dehydrogenase type-2 / Mycobacterium avium / enoyl-CoA / acetyl CoA / fumarase / 2-hydroxyhepta-2 / 4-diene-1 / 7-dioate isomerase / Rv2993c ortholog / homoprotocatechuate degradative pathway / 4-dienedioate / 2-oxohept-3-enedioate / rossmann fold / Putative oxidoreductase / NADB_Rossman superfamily / NAD / NADH / short chain dehydrogenase / NADP / non-pathogenic strain / SDR / opportunistic infections in humans / associated with swimming / fish-tank / putative uncharacterized protein / lysine-decarboxylase like protein / Molybdenum cofactor protein like protein / possibly misannotated homologs / unknown ligand / SSSGCID / tRNA methyltransferase / trmD / S-adenosyl-methionine / S-adenosyl-homocysteine / SAM / SAH / chronic lung disease / protein knot / 3(1) trefoil knot / domain swap / marinum / water-borne pathogen / fatty acid synthesis / rapid growing Mycobacterium species / water contaminant / fatty acid biosynthesis / FAB / water borne pathogen / cytidylate kinase / ADP / dCMP / dCDP / CDA / pyrimidine salvage / homotetramer / drug resistance / zinc binding protein / catalytic zinc / smegmatis / LLP / gamma amino butyric acid / GABA / GABA transferase / Gabaculine / Phenelzine / Aminooxyacetic acid / Phenylethylidenehydrazine / Vigabatrin / Valproic acid / MYCOBACERIUM MARINUM / 7-dioateisomerase / rapid growing mycobacterium / pyrimidine nucleoside monophosphate kinase / phosphotransferase / acetate kinase / enoyl-coa hydratase/isomerase / LIGASE / Phosphoribosylaminoimidazole-succinocarboxamide synthase / carnitinyl-CoA dehydratase / ACYL-COA THIOESTERASE / fumarate hydratase class II / cofactor iosynthesis / GTP / pterin / potassium ion / O-Acetylserine Sulfhydrylase (OASS) / Cysteine synthase / fumerate / malic acid / enoyl CoA hydratase / S-adenosylmethionine / AdoMet / AdoMet synthase / methyl donor / methylation / S-adenosylmethionine synthetase / Molybdenum cofactor binding protein / orthologs are possible misannotated as possible or putative lysine decarboxylases / AMP was MS verified / proteomics / GLUTARYL-COA DEHDROGENASE / FADH2 / Taurine catabolism dioxygenase / TauD / dioxygenase / protease / auto-catalytic removal of tag / metalloexopeptidase / no anomalous signal indicates magnesium ions in active site / cobalt binding / M24A family / MPT / pyranopterin-dithiolate / cofactor biosynthesis / SCD / nucleotide adenine dinucleotide / 5-hydroxy NAD / asymmetric substrate or cofactor recognition / otholog / enoyl-CoA isomerase/hydratase family protein / metabolism / unsaturated fatty acids / Probable 6-phosphogluconolactonase / TRANSPORT PROTEIN / Acyl-CoA thioesterase II / marine parasite / Cytidine monophosphate kinase / CK / acetokinase / ATP-dependent / metabolic intermediate biosynthesis / cytoplasmic / National Institute of Allergy and Infectious Diseases / pathogenic bacterium / FadB4 ortholog / virulence / cytidine / uridine / zinc binding enzyme / GabT / pyridoxal phosphate binding / aminotransferase / Mycobacterium thermoresistibile / SYNTHASE / proprionate kinase / hydrolysis / AckA / propionate kinase / acid-kinase / non-hydrolyzable ATP analog / anomalous manganese signal / unknown conjugate / iron-dependent / molecular oxygen / O-acetylhomoserine sulfhydrylase / mycobaterium / tRNA synthetase / AspS / AspRS

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