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Showing all 23 items for Latest entries: new EMDB

EMDB-4273: Fo conformation 1
Method: single particle / : Hahn A, Vonck J, Mills DJ, Kuehlbrandt W, Meier T

EMDB-4290: Human R2TP complex-subcomplex1
Method: single particle / : Munoz-Hernandez H, Pearl LH, Llorca O

EMDB-4291: Human R2TP complex-subgroup2
Method: single particle / : Munoz-Hernandez H, Pearl LH, Llorca O

EMDB-4296: Recombinant human MUC5B mucin N-terminal
Method: single particle / : Trillo-Muoy S, Nilsson HE, Hebert H, Hansson GC

EMDB-4298: Class 2 : distorted nucleosome
Method: single particle / : Bilokapic S, Halic M

EMDB-4299: Class 3 : translocated nucleosome
Method: single particle / : Bilokapic S, Halic M

EMDB-7304: Folding DNA into a lipid-conjugated nano-barrel for controlled reconstitution of membrane proteins
Method: single particle / : Dong Y, Chen S

EMDB-7324: Suppressed
Method: single particle / : Suppressed X, Suppressed X

EMDB-7362: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 010)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7363: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 011)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7364: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 012)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7365: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 013)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7366: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 014)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7367: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 015)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7368: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 016)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7404: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 051)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7405: Single Molecule 3D Image of a Hole-Hole Homodimer Species Generated in the Production of a Bispecific Recombinant IgG1 (No. 052)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7427: Single-Molecule 3D Image of Half IgG1 (No. 010)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7428: Single-Molecule 3D Image of Half IgG1 (No. 011)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7429: Single-Molecule 3D Image of Half IgG1 (No. 012)
Method: electron tomography / : Lei D, Liu J, Liu H, Lei M, Ren G

EMDB-7436: Suppressed
Method: single particle / : Suppressed X, Suppressed X

EMDB-7437: Suppressed
Method: single particle / : Suppressed X, Suppressed X

EMDB-7463: Insulin Receptor ectodomain in complex with two insulin molecules - C1 symmetry
Method: single particle / : Scapin G, Dandey VP

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Feb 20, 2018. PDBj/BINDS workshop in Osaka University

PDBj/BINDS workshop in Osaka University

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    Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

    Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

    • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
    • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
    • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

    External links: The 2017 Nobel Prize in Chemistry - Press Release

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    Jul 12, 2017. Major update of PDB

    Major update of PDB

    • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
    • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

    External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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    Jun 16, 2017. Omokage search with filter

    Omokage search with filter

    • Result of Omokage search can be filtered by keywords and the database types

    Related info.: Omokage search

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    Sep 15, 2016. EM Navigator & Yorodumi renewed

    EM Navigator & Yorodumi renewed

    • New versions of EM Navigator and Yorodumi started

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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    • Advanced data search for EMDB and EM data in PDB widh various search and display options

    Related info.: EMDB / PDB / EM Navigator / Q: What is the data source of EM Navigator? / Yorodumi Search

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