[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 808 items for (author: zia & a)

EMDB-77765:
Cryo-EM of rPFFs (recombinant preformed fibrils)
Method: helical / : Fielding LA, Zia A, Volpicelli-Daley LA, Wang F

PDB-36qd:
Cryo-EM of rPFFs (recombinant preformed fibrils)
Method: helical / : Fielding LA, Zia A, Volpicelli-Daley LA, Wang F

EMDB-71560:
YG17 peptide - ribbon
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

EMDB-71562:
YG17 peptide - thin tube
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

PDB-9pef:
YG17 peptide - ribbon
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

PDB-9peh:
YG17 peptide - thin tube
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

EMDB-71561:
YG17 peptide - open tube
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

PDB-9peg:
YG17 peptide - open tube
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

EMDB-71563:
YG17 peptide - thick tube
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

PDB-9pei:
YG17 peptide - thick tube
Method: helical / : Sonani RR, Distaffen HE, Niedzialkowska E, Nilsson BL, Egelman EH

EMDB-58700:
Amyloid beta oligomer Interactions with Extracellular Vesicles by Cryo-ET
Method: electron tomography / : Khursheed A, Viles JH, Zhang H, Shang Q, Tian Y, Szwedziak P, Volkov VA

EMDB-73866:
Raw consensus map of rEatAp complexed with Fab G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73867:
Constituent EM map: local refinement of putative MUC2 binding domain of rEatAp and Fv domain of Fab G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73868:
Constituent EM map: local refinement of putative MUC2 binding domain of rEatAp and Fab G12 from best Fab-containing 2D classes
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-72876:
N4 Full Virion C6 Tail
Method: single particle / : Bellis NF, Cingolani G

EMDB-72881:
N4 Empty Particle Portal
Method: single particle / : Bellis NF, Cingolani G

EMDB-72905:
N4 Bacteriophage Asymmetric Tail Gating Complex
Method: single particle / : Bellis NF, Cingolani G

EMDB-75838:
N4 Periplasmic Tunnel Fragment
Method: single particle / : Bellis NF, Lokareddy RK, Cingolani G

EMDB-73869:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 25
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73870:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73871:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 15
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73872:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73873:
Cryo-EM structure of Secreted extracellular protein A (SepA) from Shigella flexneri complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73874:
Cryo-EM structure of Protein involved in colonization (Pic) from Enteroaggregative Escherichia coli complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

PDB-9z76:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 25
Method: single particle / : Buckley DP, Berndsen ZT

PDB-9z77:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody G12
Method: single particle / : Buckley DP, Berndsen ZT

PDB-9z78:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 15
Method: single particle / : Buckley DP, Berndsen ZT

PDB-9z79:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

PDB-9z7a:
Cryo-EM structure of Secreted extracellular protein A (SepA) from Shigella flexneri complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

PDB-9z7b:
Cryo-EM structure of Protein involved in colonization (Pic) from Enteroaggregative Escherichia coli complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-71975:
Human apo HCN1 nanodisc
Method: single particle / : Chinn A, Chanda B

EMDB-73857:
Human HCN1 in complex with cAMP in nanodisc
Method: single particle / : Chinn A, Chanda B

PDB-9pxn:
Human apo HCN1 nanodisc
Method: single particle / : Chinn A, Chanda B

PDB-9z6t:
Human HCN1 in complex with cAMP in nanodisc
Method: single particle / : Chinn A, Chanda B

EMDB-55748:
E. coli Complex I WT purified in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

EMDB-55749:
Local refinement of E. coli Complex I WT membrane domain in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

EMDB-55750:
Local refinement of E. coli Complex I WT hydrophilic domain in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

EMDB-55751:
E. coli Complex I D79N NuoA mutant purified in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila V

EMDB-55752:
Local refinement of E. coli Complex I D79N NuoA mutant hydrophilic domain in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila VRI

EMDB-55753:
Local refinement of E. coli Complex I D79N NuoA mutant membrane domain in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila VRI

PDB-9taj:
E. coli Complex I WT purified in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

PDB-9tak:
Local refinement of E. coli Complex I WT membrane domain in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

PDB-9tal:
Local refinement of E. coli Complex I WT hydrophilic domain in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

PDB-9tam:
E. coli Complex I D79N NuoA mutant purified in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila V

PDB-9tan:
Local refinement of E. coli Complex I D79N NuoA mutant hydrophilic domain in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila VRI

PDB-9tao:
Local refinement of E. coli Complex I D79N NuoA mutant membrane domain in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila VRI

EMDB-55743:
Cryo-EM structure of Heyndrickxia coagulans beta-galactosidase
Method: single particle / : Sanita G, Maresca E, Aulitto M, Capaldi S, Esposito E, Contursi P

PDB-9ta3:
Cryo-EM structure of Heyndrickxia coagulans beta-galactosidase
Method: single particle / : Sanita G, Maresca E, Aulitto M, Capaldi S, Esposito E, Contursi P

EMDB-49891:
Cryo-EM of Class-2 of YM1P nanotube
Method: helical / : Yi M, Zia A, Egelman EH, Xu B, Wang F

EMDB-49895:
Cryo-EM of Class-3 of YM1P nanotube
Method: helical / : Yi M, Zia A, Egelman EH, Xu B, Wang F

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more