[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,140 items for (author: zhu & h)

EMDB-70055:
50S focus refined map of E.coli 70S ribosome complexed with P-site fMet-tRNAfMet and A-site R-beta(2)hydroxyBocK-tRNAPyl
Method: single particle / : Majumdar C, Cate J

EMDB-70056:
30S focus refined map of E.coli 70S ribosome complexed with P-site fMet-tRNAfMet and A-site R-beta(2)hydroxyBocK-tRNAPyl
Method: single particle / : Majumdar C, Cate J

EMDB-63803:
Plant chloroplast dicarboxylate transporter AtDiT1
Method: single particle / : Yang Z, Zhang P

EMDB-63804:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with OAA
Method: single particle / : Yang Z, Zhang P

EMDB-63805:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with 2-OG
Method: single particle / : Yang Z, Zhang P

EMDB-63806:
Plant chloroplast dicarboxylate transporter AtDiT2.1
Method: single particle / : Yang Z, Zhang P

EMDB-63807:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with malate
Method: single particle / : Yang Z, Zhang P

EMDB-63808:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with Glu
Method: single particle / : Yang Z, Zhang P

PDB-9mcr:
Plant chloroplast dicarboxylate transporter AtDiT1
Method: single particle / : Yang Z, Zhang P

PDB-9mcs:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with OAA
Method: single particle / : Yang Z, Zhang P

PDB-9mct:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with 2-OG
Method: single particle / : Yang Z, Zhang P

PDB-9mcu:
Plant chloroplast dicarboxylate transporter AtDiT2.1
Method: single particle / : Yang Z, Zhang P

PDB-9mcv:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with malate
Method: single particle / : Yang Z, Zhang P

PDB-9u32:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with Glu
Method: single particle / : Yang Z, Zhang P

EMDB-67112:
LolCDE in complex with SMT-738_1
Method: single particle / : Dong CJ, Li HT

EMDB-67113:
LolCDE in complex with SMT-738_2
Method: single particle / : Dong CJ, Li HT

EMDB-63503:
antibody 20G5 Fab in complex with human B7-H3 (IgC)
Method: single particle / : Bin L, Shuaixiang Z, kaijie H

EMDB-63505:
antibody 20G5 (Fab')2 in complex with human B7-H3
Method: single particle / : Li B, Zhou S, He K

PDB-9ly5:
antibody 20G5 Fab in complex with human B7-H3 (IgC)
Method: single particle / : Bin L, Shuaixiang Z, kaijie H

PDB-9ly6:
antibody 20G5 (Fab')2 in complex with human B7-H3
Method: single particle / : Li B, Zhou S, He K

EMDB-62333:
cryo-EM structure of lipase/ligand/substrate complex
Method: single particle / : Lu DF, Zhu DY, Liu S

PDB-9kh6:
cryo-EM structure of lipase/ligand/substrate complex
Method: single particle / : Lu DF, Zhu DY, Liu S

EMDB-52852:
structure of two human ELF2 transcription factors in complex with a nucleosome
Method: single particle / : Xiao T, Crowe-McAuliffe C, Dienemann C, Taipale J

EMDB-64277:
native GluN1/N2B receptor in the fully open state
Method: single particle / : Yu J, Ge JP, Chen JH

EMDB-64278:
native GluN1/N2B receptor in the open state TMD focused map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64279:
native GluN1/N2A/N2B-s1 consensus map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64280:
native GluN1/N2A/N2B-s1-TMD focused map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64281:
native GluN1/N2A/N2B-subtype2 consensus map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64283:
native GluN1/N2A/N2B-S2-TMD focused map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64284:
native GluN1/N2A-subtype 1-TMD focused
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64285:
native GluN1/N2B-subtype1 in closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64289:
native GluN1/N2A-subtype2-consensus map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64290:
native GluN1/N2A-subtype2-TMD focused map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64292:
native GluN1/N2A-S3-consensus map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64294:
native GluN1/N2A-S3 TMD focused map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64295:
native GluN1/N2B receptor consensus map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64296:
native GluN1/N2B-TMD-focused map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64297:
native GluN1/N2B/NX-consensus map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64298:
native GluN1/N2A/NX-TMD-focused map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64299:
native GluN1/N2B/NX composite map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64300:
native GluN1_N2A_NX_subtype-consensus map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64301:
native GluN1_N2A_NX_subtype1_TMD_focused map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64302:
native GluN1_N2A_NX_subtype1_composite_map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64303:
native GluN1_N2A_NX_S2_consensus map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64304:
native GluN1_N2A_NX_subtype2_TMD_focused
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64305:
native GluN1_N2A_NX_subtype2_composite map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64306:
native GluN1_NX_consensus_map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64307:
native GluN1_NX TMD focused map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64308:
native GluN1_GluNX composite map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64309:
native native NMDA receptor-GluN1/N2B in inactive state TMD focused map
Method: single particle / : Yu J, Xu RS, Ge JP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more