[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 38 items for (author: zhang & tw)

EMDB-63948:
Cryo-EM structure of conivaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-63949:
Cryo-EM structure of tolvaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-62289:
Cryo-EM structure of lipid-mediated dimer of human norepinephrine transporter NET in the presence of the F3288-0031 in an inward-open state at resolution of 3.1 angstrom
Method: single particle / : Zhang H, Zhang TW, Xu EH, Jiang Y

EMDB-61286:
The capsid protein of HIV 1
Method: single particle / : Yi G, Ma J, Zhang P

EMDB-61287:
The RNA polymerase II elongation complex from Saccharomyces cerevisiae
Method: single particle / : Yi G, Ma J, Zhang P

PDB-9ja0:
The capsid protein of HIV 1
Method: single particle / : Yi G, Ma J, Zhang P

PDB-9ja1:
The RNA polymerase II elongation complex from Saccharomyces cerevisiae
Method: single particle / : Yi G, Ma J, Zhang P

EMDB-38109:
MCM in the Apo state.
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38110:
Structure of MCM_apo before local refinement
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38111:
MCM in complex with dsDNA in presence of ATP.
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38112:
local refinement of MCM_apo
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38113:
local refinement of MCM_apo
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38114:
local refinement of MCM_apo
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38115:
local refinement of MCM_apo
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38116:
local refinement of MCM_apo
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38117:
local refinement of MCM_apo
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38118:
local refinement of MCM_apo
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38119:
MCM_ATP_dsDNA before local refinement
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38120:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38121:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38122:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38123:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38124:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38125:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38126:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-38127:
local refinement of MCM_ATP_dsDNA
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

PDB-8x7t:
MCM in the Apo state.
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

PDB-8x7u:
MCM in complex with dsDNA in presence of ATP.
Method: single particle / : Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Gilbert RJC, Zhang P

EMDB-16978:
Architecture of native chromatin fibres revealed by cryo-ET in situ
Method: subtomogram averaging / : Hou Z, Zhu Y, Zhang P

EMDB-16979:
Architecture of native chromatin fibres revealed by cryo-ET in situ
Method: subtomogram averaging / : Hou Z, Zhu Y, Zhang P

EMDB-16980:
Architecture of native chromatin fibres revealed by cryo-ET in situ
Method: subtomogram averaging / : Hou Z, Zhu Y, Zhang P

EMDB-40094:
17b10 fab in complex with full-length SARS-CoV-2 Spike G614 trimer
Method: single particle / : Kwon HJ, Zhang J, Kosikova M, Tang WC, Rodriguez UO, Peng HQ, Meseda CA, Pedro CL, Schmeisser F, Lu JM, Zhou B, Davis CT, Wentworth DE, Chen WH, Shriver MC, Pasetti MF, Weir JP, Chen B, Xie H

EMDB-40095:
17B10 fab in complex with up-RBD of SARS-CoV-2 Spike G614 trimer
Method: single particle / : Kwon HJ, Zhang J, Kosikova M, Tang WC, Rodriguez UO, Peng HQ, Meseda CA, Pedro CL, Schmeisser F, Lu JM, Zhou B, Davis CT, Wentworth DE, Chen WH, Shriver MC, Pasetti MF, Weir JP, Chen B, Xie H

PDB-8gjm:
17b10 fab in complex with full-length SARS-CoV-2 Spike G614 trimer
Method: single particle / : Kwon HJ, Zhang J, Kosikova M, Tang WC, Rodriguez UO, Peng HQ, Meseda CA, Pedro CL, Schmeisser F, Lu JM, Zhou B, Davis CT, Wentworth DE, Chen WH, Shriver MC, Pasetti MF, Weir JP, Chen B, Xie H

PDB-8gjn:
17B10 fab in complex with up-RBD of SARS-CoV-2 Spike G614 trimer
Method: single particle / : Kwon HJ, Zhang J, Kosikova M, Tang WC, Rodriguez UO, Peng HQ, Meseda CA, Pedro CL, Schmeisser F, Lu JM, Zhou B, Davis CT, Wentworth DE, Chen WH, Shriver MC, Pasetti MF, Weir JP, Chen B, Xie H

EMDB-21692:
PKA RIIbeta holoenzyme with DnaJB1-PKAc fusion in fibrolamellar hepatoceullar carcinoma
Method: single particle / : Lu TW, Aoto PC

EMDB-21693:
PKA RIIbeta holoenzyme with DnaJB1-PKAc fusion in fibrolamellar hepatoceullar carcinoma
Method: single particle / : Lu TW, Aoto PC

EMDB-22829:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more