[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 13,930 items for (author: zhang & j)

EMDB-64386:
Focus-refined map of C. elegans piezo channel
Method: single particle / : Liu Y, Guo YR

EMDB-52782:
Nitrogenase maturase NifEN in complex with the cofactor chaperone NifX
Method: single particle / : Schneider FF, Martin del Campo JS, Zhang L, Dean DR, Einsle O

EMDB-52783:
Nitrogenase maturase NifEN
Method: single particle / : Schneider FF, Martin del Campo JS, Zhang L, Dean DR, Einsle O

PDB-9ian:
Nitrogenase maturase NifEN in complex with the cofactor chaperone NifX
Method: single particle / : Schneider FF, Martin del Campo JS, Zhang L, Dean DR, Einsle O

PDB-9iao:
Nitrogenase maturase NifEN
Method: single particle / : Schneider FF, Martin del Campo JS, Zhang L, Dean DR, Einsle O

EMDB-63199:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM1/2/4
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63200:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM3/4/5
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63201:
Cryo-EM structure of D1R in complex with de novo designed negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63202:
Cryo-EM structure of D1R-Gs in complex with de novo designed agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63204:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targetingTM1/2/4 and GEM targeting TM3/4/5, and agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9lle:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM1/2/4
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llf:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM3/4/5
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llg:
Cryo-EM structure of D1R in complex with de novo designed negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llh:
Cryo-EM structure of D1R-Gs in complex with de novo designed agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llj:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targetingTM1/2/4 and GEM targeting TM3/4/5, and agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63769:
the complex of D14 and RGSV P3
Method: single particle / : Huang YC

EMDB-63484:
Subtomogram average of GEM-mCherry-nanobody particles on A549 cell membranes
Method: subtomogram averaging / : Zou T, Zhang J, Zhang Y, Zhang M, Pan Y, Wang H

EMDB-63519:
Cryo-EM structure of transducer in complex with chimeric receptor
Method: single particle / : Zhai X, Mao C, Shen Q, Zang S, Shen D, Zhang H, Chen Z, Wang G, Zhang C, Zhang Y, Liu Z

EMDB-63520:
Cryo-EM structure of chimeric receptor in complex with transduce
Method: single particle / : Zhai X, Mao C, Shen Q, Zang S, Shen D, Zhang H, Chen Z, Wang G, Zhang C, Zhang Y, Liu Z

EMDB-63203:
Cryo-EM structure of D1R in complex with de novo designed GEM targeting TM1/2/4 and GEM targeting TM3/4/5, and negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9lli:
Cryo-EM structure of D1R in complex with de novo designed GEM targeting TM1/2/4 and GEM targeting TM3/4/5, and negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-56906:
In situ structure of the open-linker H1-bound nucleosome
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-47324:
Cryo-EM Structure of Receptor Tyrosine Kinase ROS1 in Complex with Fab-CT4
Method: single particle / : Li H, Klein D

EMDB-71895:
Cryo-EM structure of receptor tyrosine kinase ROS1 extracellular domain
Method: single particle / : Li H, Klein D

EMDB-71938:
Cryo-EM structure of receptor tyrosine kinase ROS1 extracellular domain in complex with NELL2
Method: single particle / : Li H, Klein D

EMDB-75142:
Cryo-EM structure of receptor tyrosine kinase ROS1 in complex with NELL2
Method: single particle / : Li H, Klein D

EMDB-75151:
Cryo-EM structure of Receptor Tyrosine Kinase ROS1 in complex with Fab-RX5
Method: single particle / : Li H, Klein D

PDB-10ft:
Cryo-EM structure of receptor tyrosine kinase ROS1 in complex with NELL2
Method: single particle / : Li H, Klein D

PDB-10gh:
Cryo-EM structure of Receptor Tyrosine Kinase ROS1 in complex with Fab-RX5
Method: single particle / : Li H, Klein D

PDB-9dz4:
Cryo-EM Structure of Receptor Tyrosine Kinase ROS1 in Complex with Fab-CT4
Method: single particle / : Li H, Klein D

PDB-9pvp:
Cryo-EM structure of receptor tyrosine kinase ROS1 extracellular domain
Method: single particle / : Li H, Klein D

PDB-9pwq:
Cryo-EM structure of receptor tyrosine kinase ROS1 extracellular domain in complex with NELL2
Method: single particle / : Li H, Klein D

EMDB-71798:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) extended state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

EMDB-71799:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) docked state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

EMDB-71800:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) with enantiomer of 17-hydroxyprogesterone caproate
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

PDB-9pr5:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) extended state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

PDB-9pr6:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) docked state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

PDB-9pr7:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) with enantiomer of 17-hydroxyprogesterone caproate
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

EMDB-65575:
Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

EMDB-65601:
Cryo-EM map of a 3-repeat filament from mouse oocyte Cytoplasmic Lattice (CPL)
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

PDB-9w2m:
Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

EMDB-49283:
A non-averaged 3D density map of an individual particle, with a 2D lattice formed by octahedral DNA origami and ferritin, was revealed by individual particle cryo-electron tomography (Arm #09 of Particle #001).
Method: electron tomography / : Liu J, Ren G

EMDB-49285:
A non-averaged 3D density map of an individual particle, with a 2D lattice formed by octahedral DNA origami and ferritin, was revealed by individual particle cryo-electron tomography (Arm #11 of Particle #001).
Method: electron tomography / : Liu J, Ren G

EMDB-49286:
A 3D density map of a 2D lattice formed by octahedral DNA origami with 100% loaded ferritin, was revealed by IMOD (Tomo #1).
Method: electron tomography / : Liu J, Ren G

EMDB-49287:
A 3D density map of a 2D lattice formed by octahedral DNA origami with 100% loaded ferritin, was revealed by IMOD (Tomo #2).
Method: electron tomography / : Liu J, Ren G

EMDB-49288:
A 3D density map of a 2D lattice formed by octahedral DNA origami with 70% loaded ferritin, was revealed by IMOD (Tomo #3).
Method: electron tomography / : Liu J, Ren G

EMDB-49289:
A 3D density map of a 2D lattice formed by octahedral DNA origami without ferritin, was revealed by IMOD (Tomo #4).
Method: electron tomography / : Liu J, Ren G

EMDB-64277:
native GluN1/N2B receptor in the fully open state
Method: single particle / : Yu J, Ge JP, Chen JH

EMDB-64278:
native GluN1/N2B receptor in the open state TMD focused map
Method: single particle / : Yu J, Xu RS, Ge JP

EMDB-64279:
native GluN1/N2A/N2B-s1 consensus map in the closed state
Method: single particle / : Yu J, Xu RS, Ge JP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more