[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,233 items for (author: ze & l)

EMDB-64382:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2G5
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

EMDB-64495:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2B1
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

EMDB-64496:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2B11
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

EMDB-64535:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2H4
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

PDB-9uot:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2G5
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

PDB-9uto:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2B1
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

PDB-9utp:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2B11
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

PDB-9uvq:
Cryo-EM structure of the oxytocin receptor bound to nanobody Nb2H4
Method: single particle / : Gao K, Nie J, Zhang X, Liu X

EMDB-66626:
Type A 2N4R human tau filaments induced by heparan sulfate with a single-protofilament fold
Method: helical / : Zeng W, Sun S, Shi Y, He Z

EMDB-74262:
Cryo-electron tomography and subtomogram averaging of Leishmania tarentolae Central Pair Complex
Method: subtomogram averaging / : Wilburn D, Nicastro D

EMDB-74258:
Ciliary 96-nm repeat unit from Leishmania tarentolae, generated via cryo-electron tomography and subtomogram averaging
Method: subtomogram averaging / : Wilburn D, Nicastro D

EMDB-78435:
Plasmodium falciparum 17-PF subpellicular microtubule
Method: single particle / : Zeng J, Zhang R

EMDB-78436:
Plasmodium falciparum 18-PF subpellicular microtubule
Method: single particle / : Zeng J, Zhang R

EMDB-78437:
Plasmodium falciparum 17-PF subpellicular microtubule associated with human hemoglobin (local refined map)
Method: single particle / : Zeng J, Zhang R

EMDB-78438:
Plasmodium falciparum 17-PF subpellicular microtubule associated with human hemoglobin
Method: single particle / : Zeng J, Zhang R

EMDB-72334:
Human mitochondrial ClpP in complex with OICR-18704 in the heptameric state
Method: single particle / : Uday AB, Zeytuni N, Goncalves M, Vahidi S

EMDB-72336:
Human mitochondrial ClpP in complex with OICR-18704 in a partially-engaged tetradecameric state (minimal opening)
Method: single particle / : Uday AB, Zeytuni N, Goncalves M, Vahidi S

EMDB-72337:
Human mitochondrial ClpP in complex with OICR-18704 in a partially-engaged tetradecameric state (intermediate opening)
Method: single particle / : Uday AB, Zeytuni N, Goncalves M, Vahidi S

EMDB-72338:
Human mitochondrial ClpP in complex with OICR-18704 in a partially-engaged tetradecameric state (maximal opening)
Method: single particle / : Uday AB, Zeytuni N, Goncalves M, Vahidi S

EMDB-72339:
Human mitochondrial ClpP V62A variant
Method: single particle / : Uday AB, Zeytuni N, Goncalves M, Vahidi S

PDB-9xyh:
Human mitochondrial ClpP in complex with OICR-18704 in the heptameric state
Method: single particle / : Uday AB, Zeytuni N, Goncalves M, Vahidi S

PDB-9xyj:
Human mitochondrial ClpP V62A variant
Method: single particle / : Uday AB, Zeytuni N, Goncalves M, Vahidi S

EMDB-76071:
Cryo-EM structure of dimeric Nitrogenase MoFe protein from Methanosarcina acetivorans
Method: single particle / : Kashyap R, Antony E

PDB-11uy:
Cryo-EM structure of dimeric Nitrogenase MoFe protein from Methanosarcina acetivorans
Method: single particle / : Kashyap R, Antony E

EMDB-55646:
Cryo-EM structure of GPCR-miniGo Protein complex
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55647:
Cryo-EM structure of GPCR-miniGo Protein complex
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55648:
Cryo-EM structure of GPCR-miniGo Protein complex
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55662:
Cryo-EM structure of GPCR-miniGo Protein complex
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55663:
Cryo-EM structure of GPCR-miniGo Protein complex
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55664:
Cryo-EM structure of GPCR-miniGo Protein complex
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-73000:
PC94-A.15 Fab in complex with BG505 SOSIP trimer and RM20A3 Fab
Method: single particle / : Phulera S, Omorodion O, Ward AB, Ozorowski G

EMDB-73007:
PC94-A.16 Fab in complex with P94_v18_c046 Chimera DS-SOSIP trimer and RM20A3 Fab
Method: single particle / : Phulera S, Omorodion O, Ward AB, Ozorowski G

EMDB-73008:
PC94-A.31 Fab in complex with BG505 SOSIP trimer and RM20A3 Fab
Method: single particle / : Phulera S, Omorodion O, Ward AB, Ozorowski G

EMDB-73009:
PC94-A.30 Fab in complex with BG505 SOSIP trimer and RM20A3 Fab
Method: single particle / : Phulera S, Omorodion O, Ward AB, Ozorowski G

EMDB-73010:
PC94-A.27 Fab in complex with P94_v18_c046 Chimera DS-SOSIP trimer and RM20A3 Fab
Method: single particle / : Phulera S, Omorodion O, Ward AB, Ozorowski G

EMDB-65074:
Complex structure of BoNT-like PG1 at pH 6.0
Method: single particle / : Liu Z, Chen P

EMDB-55896:
Structure of B10 anti-stem antibody in complex with ZEBOV spike complex
Method: single particle / : Diskin R, Cohen-Dvashi H, Shuker H

EMDB-77961:
S. aureus DNA Gyrase in complex with OSUAB-0276 and DNA
Method: single particle / : Wheat CT, Bell CE

EMDB-80423:
Cryo-EM structure of the human SAM50-engaged SAM complex
Method: single particle / : Yan L, Guan Z, Wang Q, Yin P

EMDB-80424:
Cryo-EM structure of the human SAM complex
Method: single particle / : Yan L, Guan Z, Wang Q, Yin P

PDB-25wf:
Cryo-EM structure of the human SAM50-engaged SAM complex
Method: single particle / : Yan L, Guan Z, Wang Q, Yin P

PDB-25wg:
Cryo-EM structure of the human SAM complex
Method: single particle / : Yan L, Guan Z, Wang Q, Yin P

EMDB-79039:
Australian bat lyssavirus glycoprotein PH domain in complex with broadly neutralizing human antibodies A6 and RVC20
Method: single particle / : Xu K, Xu Y

PDB-38pm:
Australian bat lyssavirus glycoprotein PH domain in complex with broadly neutralizing human antibodies A6 and RVC20
Method: single particle / : Xu K, Xu Y

EMDB-72398:
Cryo EM Structure of Full Length mGluR8 in Complex with Beta-Arrestin-1 Bound to Agonist L-AP4 and PAM VU6005649
Method: single particle / : Marx DC, Levitz JT

EMDB-72399:
Cryo EM Structure of Full lengthmGluR8 Bound to Agonist L-AP4 and PAM VU6005649 in complex with G proteins
Method: single particle / : Marx DC, Levitz JT

PDB-9y1m:
Cryo EM Structure of Full Length mGluR8 in Complex with Beta-Arrestin-1 Bound to Agonist L-AP4 and PAM VU6005649
Method: single particle / : Marx DC, Levitz JT

PDB-9y1n:
Cryo EM Structure of Full lengthmGluR8 Bound to Agonist L-AP4 and PAM VU6005649 in complex with G proteins
Method: single particle / : Marx DC, Levitz JT

PDB-32fd:
Cryo-EM structure of cariprazine-bound D3 dopamine receptor with mini-Go (alternative conformation)
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55065:
Cryo-EM structure of the Arabidopsis thaliana CAT4 transporter in the outward-open L-ornithine bound state
Method: single particle / : Kolokouris D, Newstead S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more