[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 14,907 items for (author: zhang & y)

EMDB-66358:
Cryo-EM structure of TMEM63A-digitonin-cholesterol
Method: single particle / : Lin Y, Zhou Z, Han Y, Cheng D, Wang H, Ju L, Zhang Y, Cox DC, Corry B

PDB-9wxv:
Cryo-EM structure of TMEM63A-digitonin-cholesterol
Method: single particle / : Lin Y, Zhou Z, Han Y, Cheng D, Wang H, Ju L, Zhang Y, Cox DC, Corry B

EMDB-66378:
Cryo-EM structure of EvAS
Method: single particle / : Lyu RQ, Bai L

EMDB-66379:
Cryo-EM structure of PbSS
Method: single particle / : Bai L, Lyu RQ

EMDB-66380:
Cryo-EM structure of the PT domain of EvSS
Method: single particle / : Bai L, Lyu RQ

EMDB-66433:
Cryo-EM structure of EvSS
Method: single particle / : Bai L, Lyu RQ

PDB-9wyv:
Cryo-EM structure of EvAS
Method: single particle / : Lyu RQ, Bai L

PDB-9wyx:
Cryo-EM structure of PbSS
Method: single particle / : Bai L, Lyu RQ

PDB-9wz3:
Cryo-EM structure of the PT domain of EvSS
Method: single particle / : Bai L, Lyu RQ

PDB-9x0f:
Cryo-EM structure of EvSS
Method: single particle / : Bai L, Lyu RQ

EMDB-49520:
Focused refinement of the prefusion F glycoprotein ectodomain of Nipah virus in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-68674:
Composite map of in situ structure of the 96-nm repeat DMT in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Sun F

EMDB-68702:
Consensus map of in situ structure of the 96-nm repeat DMT in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Sun F

EMDB-63785:
Cryo-EM structure of dopaminated Tau fibril
Method: helical / : Liu Z, Li X, Liu C

PDB-9mc2:
Cryo-EM structure of dopaminated Tau fibril
Method: helical / : Liu Z, Li X, Liu C

EMDB-64556:
Cryo-EM structure of human V1aR bound with balovaptan at a resolution of 3.0 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-64559:
Cryo-EM structure of human V1aR bound with SRX246 at a resolution of 2.6 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-66695:
Cryo-EM structure of human V1aR in apo state at a resolution of 2.8 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

PDB-9uwj:
Cryo-EM structure of human V1aR bound with balovaptan at a resolution of 3.0 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

PDB-9uwl:
Cryo-EM structure of human V1aR bound with SRX246 at a resolution of 2.6 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

PDB-9xb1:
Cryo-EM structure of human V1aR in apo state at a resolution of 2.8 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-72964:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

EMDB-72965:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yha:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yhb:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

EMDB-63344:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 1
Method: single particle / : Xiong Y, Zang J

EMDB-63345:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 2
Method: single particle / : Xiong Y, Zang J

EMDB-63346:
cryo-EM structure of Mis151-249-Cnp1 nucleosome complex
Method: single particle / : Xiong Y, Zang J

PDB-9lrv:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 1
Method: single particle / : Xiong Y, Zang J

PDB-9lrw:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 2
Method: single particle / : Xiong Y, Zang J

EMDB-49942:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

PDB-9nyr:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

EMDB-63308:
Cryo-EM structure of the JN241-9-bound state 1c of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9lqx:
Cryo-EM structure of the JN241-9-bound state 1c of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-63313:
Cryo-EM structure of the JN241-9-bound APLNR dimer-Gi complex
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9lr2:
Cryo-EM structure of the JN241-9-bound APLNR dimer-Gi complex
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-63307:
Cryo-EM structure of the JN241-9-bound state 1b of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9lqw:
Cryo-EM structure of the JN241-9-bound state 1b of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-74907:
Soluble ectodomain of Herpes simplex virus 2 (HSV-2) glycoprotein B (gB) in the prefusion conformation in complex with 2c and D48 Fabs
Method: single particle / : Sponholtz MR, Johnson NV, McLellan JS

EMDB-63314:
Cryo-EM structure of the AMG986-bound APLNR monomer-Gi complex
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9lr3:
Cryo-EM structure of the AMG986-bound APLNR monomer-Gi complex
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-63310:
Cryo-EM structure of the AMG986-bound state 2b of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9lqz:
Cryo-EM structure of the AMG986-bound state 2b of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-63305:
Cryo-EM structure of the JN241-9-bound state 1a of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9lqu:
Cryo-EM structure of the JN241-9-bound state 1a of APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-70676:
Cryo-EM Structure of the Escherichia phage HK446 Rip1 in complex with the Enterobacteria phage T6 small terminase
Method: single particle / : Patel PH, Maxwell KL, Norris MJ

EMDB-63304:
Cryo-EM structure of the Apo-state APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9lqt:
Cryo-EM structure of the Apo-state APLNR homodimer
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-63526:
Subtomogram average of GEM-mCherry-nanobody labeled EGFR on A549 cell membranes
Method: subtomogram averaging / : Zou T, Zhang J, Zhang Y, Zhang M, Wang H, Pan Y

EMDB-63312:
Cryo-EM structure of the JN241-9-bound APLNR monomer-Gi complex
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more