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Showing 1 - 50 of 93 items for (author: yutaro & s)

EMDB-49839:
ATPase Hybrid F1 with the ancestral core domains Binding Dwell
Method: single particle / : Stewart AG, Noji H, Sobti M, Suzuki AK

EMDB-49840:
ATPase Hybrid F1 with the ancestral core domains Catalytic Dwell
Method: single particle / : Stewart AG, Noji H, Sobti M, Suzuki AK

EMDB-49841:
ATPase hybrid F1 with the ancestral core domains Hexamer without stalk Binding dwell
Method: single particle / : Stewart AG, Noji H, Sobti M, Suzuki AK

EMDB-49842:
ATPase hybrid F1 with the ancestral core domains Tetramer with stalk Binding Dwell
Method: single particle / : Stewart AG, Noji H, Sobti M, Suzuki AK

EMDB-49843:
ATPase hybrid F1 with the ancestral core domains Tetramer no stalk Binding Dwell
Method: single particle / : Stewart AG, Noji H, Sobti M, Suzuki AK

PDB-9nvl:
ATPase Hybrid F1 with the ancestral core domains Binding Dwell
Method: single particle / : Stewart AG, Noji H, Sobti M, Suzuki AK

PDB-9nvm:
ATPase Hybrid F1 with the ancestral core domains Catalytic Dwell
Method: single particle / : Stewart AG, Noji H, Sobti M, Suzuki AK

EMDB-60764:
Local refinement structure of sEGFR and 528 Fv (from HL-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60765:
HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60766:
HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60767:
HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60768:
Local refinement structure of sEGFR and 528 Fv (from LH-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60769:
LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60770:
LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60771:
LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ip7:
Local refinement structure of sEGFR and 528 Fv (from HL-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ip8:
Poly-alanine model for HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ip9:
Poly-alanine model for HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipa:
Poly-alanine model for HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipb:
Local refinement structure of sEGFR and 528 Fv (from LH-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipc:
Poly-alanine model for LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipd:
Poly-alanine model for LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipe:
Poly-alanine model for LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-39431:
Structure of Cas9-sgRNA ribonucleoprotein bound to nucleosome
Method: single particle / : Nagamura R, Kujirai T, Kusakizako T, Hirano H, Kurumizaka H, Nureki O

PDB-8yny:
Structure of Cas9-sgRNA ribonucleoprotein bound to nucleosome
Method: single particle / : Nagamura R, Kujirai T, Kusakizako T, Hirano H, Kurumizaka H, Nureki O

EMDB-39306:
SpCas9-MMLV RT-pegRNA-target DNA complex (termination) overall map
Method: single particle / : Shuto O, Nakagawa R, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Nureki O

EMDB-39307:
SpCas9-MMLV RT-pegRNA-target DNA complex (termination) focused map
Method: single particle / : Shuto Y, Nakagawa R, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Nureki O

EMDB-39308:
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation) overall map
Method: single particle / : Shuto Y, Nakagawa R, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Nureki O

EMDB-39309:
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation) focused map
Method: single particle / : Shuto Y, Nakagawa R, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Nureki O

EMDB-39314:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt) overall map
Method: single particle / : Yutaro S, Ryoya N, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Osamu N

EMDB-39315:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt) focused map
Method: single particle / : Shuto Y, Nakagawa R, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Nureki O

EMDB-39316:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt) overall map
Method: single particle / : Shuto Y, Nakagawa R, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Nureki O

EMDB-39317:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt) focused map
Method: single particle / : Shuto Y, Nakagawa R, Mizuki H, Satoshi NO, Hisato H, Yuzuru I, Nureki O

EMDB-37858:
SpCas9-MMLV RT-pegRNA-target DNA complex (termination)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-37859:
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-37860:
SpCas9-pegRNA-target DNA complex (pre-initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-37861:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-39253:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wus:
SpCas9-MMLV RT-pegRNA-target DNA complex (termination)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wut:
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wuu:
SpCas9-pegRNA-target DNA complex (pre-initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wuv:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8ygj:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-42149:
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
Method: single particle / : Finney J, Kong S, Walsh Jr RM, Harrison SC, Kelsoe G

PDB-8udg:
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
Method: single particle / : Finney J, Kong S, Walsh Jr RM, Harrison SC, Kelsoe G

EMDB-34741:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Someya T, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-34742:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11 focused on RBD and NIV-11 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Someya T, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-8hgl:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Someya T, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-8hgm:
Structure of SARS-CoV-2 spike RBD in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Someya T, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33820:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 focused on RBD and NIV-8 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Someya T, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

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  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

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