[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,027 items for (author: yue & j)

EMDB-66305:
Cryo-EM Structure of Parabacteroide phage PD491P1 Capsid
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-66306:
Cryo-EM Structure of Parabacteroide phage PD491P1 head-to-tail interface
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-66307:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C6 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-66308:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C3 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9ww9:
Cryo-EM Structure of Parabacteroide phage PD491P1 Capsid
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9wwa:
Cryo-EM Structure of Parabacteroide phage PD491P1 head-to-tail interface
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9wwb:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C6 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9wwc:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C3 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-76766:
H-ring in Vibrio cholerae at closed state of P-ring
Method: single particle / : Guo WB, Yue J, Liu J

EMDB-76767:
Sheathed flagellar motor structure with C1 symmetry in Vibrio cholerae
Method: single particle / : Guo WB, Yue J, Liu J

EMDB-63580:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63581:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63583:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-80947:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-26xh:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-9m1r:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1s:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1u:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-55239:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-55240:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1_3D classification map containing the complete nucleic acid scaffold
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

PDB-9sv6:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-72947:
LPHT-ring subunit with C13 MotX in Vibrio cholerae at assembled state
Method: single particle / : Guo W, Yue J, Liu J

PDB-9yh0:
LPHT-ring subunit with C13 MotX in Vibrio cholerae at assembled state
Method: single particle / : Guo W, Yue J, Liu J

EMDB-72815:
LPHT-ring in Vibrio cholerae at assembled, opened state
Method: single particle / : Guo W, Yue J

EMDB-72833:
H-ring subunit FlgO and FlgP in Vibrio cholerae at assembled, opened state
Method: single particle / : Guo W, Yue J

EMDB-72834:
LPHT-ring in Vibrio cholerae at disassembled, closed state
Method: single particle / : Guo W, Yue J

EMDB-72840:
RBM3 domain of FliF protein in MS-ring of flagellar motor in Vibrio cholerae
Method: single particle / : Guo W, Yue J

EMDB-72847:
LPHT-ring in Vibrio cholerae at disassembled, closed state
Method: single particle / : Guo W, Yue J

EMDB-72848:
T-ring-PomB complex in Vibrio cholerae
Method: single particle / : Guo W, Yue J

EMDB-72849:
Rod-hook protein in Vibrio cholerae at assembled, opened state
Method: single particle / : Guo W, Yue J

EMDB-72891:
Flagellar outer membrane complex in Vibrio cholerae at disassembled, closed state
Method: single particle / : Guo W, Yue J, Liu J

EMDB-72961:
Composite structure of the sheathed flagellar motor in Vibrio cholerae adopting a lower FOMC conformation
Method: single particle / : Guo WB, Yue J, Liu J, Jun L

PDB-9ydo:
LPHT-ring in Vibrio cholerae at assembled, opened state
Method: single particle / : Guo W, Yue J

PDB-9yds:
H-ring subunit FlgO and FlgP in Vibrio cholerae at assembled, opened state
Method: single particle / : Guo W, Yue J

PDB-9ydt:
LPHT-ring in Vibrio cholerae at disassembled, closed state
Method: single particle / : Guo W, Yue J

PDB-9ydx:
RBM3 domain of FliF protein in MS-ring of flagellar motor in Vibrio cholerae
Method: single particle / : Guo W, Yue J

PDB-9yec:
LPHT-ring in Vibrio cholerae at disassembled, closed state
Method: single particle / : Guo W, Yue J

PDB-9yed:
T-ring-PomB complex in Vibrio cholerae
Method: single particle / : Guo W, Yue J

PDB-9yee:
Rod-hook protein in Vibrio cholerae at assembled, opened state
Method: single particle / : Guo W, Yue J

PDB-9yfg:
Flagellar outer membrane complex in Vibrio cholerae at disassembled, closed state
Method: single particle / : Guo W, Yue J, Liu J

PDB-9yh6:
Composite structure of the sheathed flagellar motor in Vibrio cholerae adopting a lower FOMC conformation
Method: single particle / : Guo WB, Yue J, Liu J

EMDB-72963:
Composite structure of the sheathed flagellar motor in Vibrio cholerae adopting a higher FOMC conformation
Method: single particle / : Guo WB, Yue J

PDB-9yh7:
Composite structure of the sheathed flagellar motor in Vibrio cholerae adopting a higher FOMC conformation
Method: single particle / : Guo WB, Yue J

EMDB-48081:
Subtomogram average structure of MS-ring in Borrelia burgdorferi
Method: subtomogram averaging / : Yue J, Jun L

EMDB-48082:
Subtomogram average structure of flagellar export apparatus and MS-ring of deleted flhA in Borrelia burgdorferi
Method: subtomogram averaging / : Yue J, Liu J

EMDB-64587:
Local refinement of Succinate bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64588:
Local refinement of maleic acid bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64589:
Local refinement of ITA bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64590:
Local refinement of AKG bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxn:
Local refinement of Succinate bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more