[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 96 items for (author: young & mj)

EMDB-48855:
Cryo-EM structure of the magnesium transporter MgtA in E1-like and E2-P conformations at 2.59 angstroms
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-48923:
Cryo-EM structure of the magnesium transporter MgtA in the E2 conformation with bound beryllium fluoride (BeF3-) and Mg2+ at 2.65 A resolution.
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-48602:
Cryo-EM Structure of the Magnesium Transporter MgtA in the E2 Conformation Bound to Mg2+
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-48191:
Cryo-EM structure of the magnesium transporter MgtA in an E1-like conformation with bound Mg2+ ions
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-48575:
G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48591:
G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-46946:
TRIF TIR Filament Cryo-EM Structure
Method: helical / : Manik MK, Xiao L, Wu H

EMDB-46977:
CryoEM structure of the TIR domain from human TRAM
Method: helical / : Hedger A, Pospich S, Pan M, Gu W, Ve T, Raunser S, Landsberg M, Nanson JD, Kobe B

EMDB-29530:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-29531:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-40240:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-28036:
Cryo-EM structure of the full-length human NF1 dimer
Method: single particle / : Darling JE, Merk A, Grisshammer R, Ognjenovic J

EMDB-40253:
Truncated Braf/Mek/14-3-3 complex
Method: single particle / : Eck MJ, Jeon H, Park E, Rawson S

EMDB-27428:
Cryo-EM structure of a RAS/RAF complex (state 1)
Method: single particle / : Eck MJ, Jeon H, Park E, Rawson S

EMDB-27429:
Cryo-EM structure of a RAS/RAF complex (state 2)
Method: single particle / : Eck MJ, Jeon H, Park E, Rawson S

EMDB-27826:
Cryo-EM structure of the full-length human NF1 dimer
Method: single particle / : Darling JE, Merk A, Grisshammer R, Ognjenovic J

EMDB-27777:
Streptomyces venezuelae RNAP transcription open promoter complex with WhiA and WhiB transcription factors
Method: single particle / : Lilic M, Campbell EA

EMDB-27778:
Streptomyces venezuelae RNAP unconstrained open promoter complex with WhiA and WhiB transcription factors
Method: single particle / : Lilic M, Campbell EA

EMDB-26727:
Structure of the human coronavirus CCoV-HuPn-2018 spike glycoprotein with domain 0 in the proximal conformation
Method: single particle / : Tortorici MA, Veesler D

EMDB-26729:
CCoV-HuPn-2018 S in the proximal conformation (local refinement of domain 0)
Method: single particle / : Tortorici MA, Veesler D

EMDB-26730:
Structure of the human coronavirus CCoV-HuPn-2018 spike glycoprotein with domain 0 in the swung out conformation
Method: single particle / : Tortorici MA, Veesler D

EMDB-26731:
CCoV-HuPn-2018 S in the swung out conformation (local refinement of domain 0)
Method: single particle / : Tortorici MA, Veesler D

EMDB-26507:
SARS-CoV-2 spike in complex with Multivalent miniprotein inhibitor FUS231-P24 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26508:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS231-P24 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26509:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26510:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26511:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26512:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-24346:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-80 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24348:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-081 Fab
Method: single particle / : Saphire EO, Li H

EMDB-24349:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-091 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24350:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-094 VHH-Fc
Method: single particle / : Saphire EO, Li H

EMDB-24351:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-096 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24358:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-147 IgG
Method: single particle / : Saphire EO, Yu X

EMDB-24359:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-246 IgG
Method: single particle / : Saphire EO, Rayaprolu V

EMDB-24335:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-259 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24336:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-186 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24337:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-199 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24338:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-249 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24339:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-252 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24340:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-049 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24341:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-073 scFv
Method: single particle / : Saphire EO, Li H

EMDB-24342:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-043 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24343:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-010 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24344:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-148 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24345:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-002 Fab
Method: single particle / : Saphire EO, Li H

EMDB-24352:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-250 Fab
Method: single particle / : Saphire EO, Li H

EMDB-24353:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-063 scFv
Method: single particle / : Saphire EO, Li H

EMDB-24354:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-021 Fab
Method: single particle / : Saphire EO, Li H

EMDB-24355:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-247 IgG
Method: single particle / : Saphire EO, Li H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more