[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 188 items for (author: yang & jy)

EMDB-63892:
C3 convertases zymogen C4b2 in activation state
Method: single particle / : Yang XK, Xiao JY

EMDB-63893:
C3 convertases zymogen C4b2 in loading state
Method: single particle / : Yang XK, Xiao JY

EMDB-63894:
CP/MBL pathways C3 convertase C4b2a and C3 complex
Method: single particle / : Yang XK, Xiao JY

EMDB-63895:
AP pathways C3 convertase C3bBbP and C3 complex
Method: single particle / : Yang XK, Xiao JY

EMDB-62490:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-62491:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in UQ1-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-62495:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in pydiflumetofen-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-63115:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in Y19315-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-49092:
Structure of the Rattus norvegicus ACE2 receptor bound HsItaly2011 RBD complex
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-49093:
Eptesicus fuscus ACE2 peptidase domain bound to VsCoV-a7 RBD complex
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-61620:
Cryo-EM structure of human SLFN14
Method: single particle / : Luo M, Jia XD, Wang ZW, Yang JY, Zhang QF, Gao S

EMDB-45253:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46691:
Merbecovirus PnNL2018B Spike glycoprotein RBD bound to the P. Nathusii ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-60483:
Cryo-EM structure of P.nat ACE2 mutant in complex with MOW15-22 RBD
Method: single particle / : Tang J, Deng Z

EMDB-39291:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in pyraclostrobin-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-39323:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in YF23694-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60256:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in Metyltetraprole-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60317:
Cryo-EM structure of pyraclostrobin-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Li ZW, Cui GR, Yang GF

EMDB-60320:
Cryo-EM structure of Metyltetraprole-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-60323:
Cryo-EM structure of YF23694-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-35962:
Immune complex of W328-6H2 Fab binding the RBD of Omicron BA.1 6p spike protein added BS3 crosslinker
Method: single particle / : Nan XY, Li YJ, Li JY

EMDB-42917:
De novo designed KWOCA 18 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42919:
De novo designed KWOCA 18 nanoparticle - Assembly in D5 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42921:
De novo designed KWOCA 70 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42924:
De novo designed KWOCA 70 nanoparticle - Assembly in D3 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-45175:
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-61291:
Cryo-EM structure of Tdk1 tetramer complex
Method: single particle / : Zhang J, Ye K

EMDB-61290:
Cryo-EM structure of Tdk1-Bdf1 complex
Method: single particle / : Zhang J, Ye K

EMDB-38702:
Cryo-EM structure of ETBR bound with BQ3020
Method: single particle / : Hou JY, Liu SH, Wu LJ, Liu ZJ, Hua T

EMDB-38704:
Cryo-EM structure of ETBR bound with Endothelin1
Method: single particle / : Hou JY, Liu SH, Wu LJ, Liu ZJ, Hua T

EMDB-38705:
Cryo-EM structure of ETAR bound with Endothelin1
Method: single particle / : Hou JY, Liu SH, Wu LJ, Liu ZJ, Hua T

EMDB-38706:
Cryo-EM structure of ETAR bound with Macitentan
Method: single particle / : Hou JY, Liu SH, Wu LJ, Liu ZJ, Hua T

EMDB-38707:
Cryo-EM structure of ETAR bound with Ambrisentan
Method: single particle / : Hou JY, Liu SH, Wu LJ, Liu ZJ, Hua T

EMDB-38708:
Cryo-EM structure of ETAR bound with Zibotentan
Method: single particle / : Hou JY, Liu SH, Wu LJ, Liu ZJ, Hua T

EMDB-38694:
Human TOM complex with whole Tom20
Method: single particle / : Tian XY, Su JY, Sui SF

EMDB-60277:
TOM core complex
Method: single particle / : Tian XY, Su JY, Sui SF

EMDB-60278:
whole Tom20
Method: single particle / : Tian XY, Su JY, Sui SF

EMDB-44965:
Sub-tomogram average of the RSV M lattice from native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44966:
Sub-tomogram average of a pair of RSV F trimers from native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44968:
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44969:
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44971:
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-36840:
3-Methylcrotonyl-CoA Carboxylase in MCCD state with Acetyl CoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36704:
Human 3-methylcrotonyl-CoA carboxylase in MCCU state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36705:
Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36706:
Human 3-methylcrotonyl-CoA carboxylase in BCCP-H1 state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-44351:
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, V1
Method: single particle / : Coupland EM, Rubinstein JL

EMDB-44350:
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, Vo
Method: single particle / : Coupland CE, Rubinstein JL

EMDB-44352:
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, peripheral stalks
Method: single particle / : Coupland CE, Rubinstein JL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more