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Showing all 42 items for (author: yamazaki & m)

EMDB-68586:
Cryo-EM consensus map of Bovine lactoferrin in TBS buffer
Method: single particle / : Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T

EMDB-63646:
I-shaped amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-63647:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 1)
Method: helical / : Burton-Smith RN, Murata K

EMDB-63648:
V'-shaped short pitch amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-64274:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 2)
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5p:
I-type amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5q:
V-type (V1-type) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5r:
ES-type (short pitch) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9umh:
V-type (V2-type) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-60617:
Tubular PuuE complex with C4 symmetry
Method: helical / : Noji M, Sugita Y, Suzuki Y

EMDB-60618:
Tubular PuuE complex with C5 symmetry
Method: helical / : Noji M, Sugita Y, Suzuki Y

EMDB-60619:
Tubular PuuE complex with C6 symmetry
Method: helical / : Noji M, Sugita Y, Suzuki Y

EMDB-60620:
Tubular PuuE D-loop complex with C3 symmetry
Method: helical / : Noji M, Sugita Y, Suzuki Y

EMDB-60621:
Tubular PuuE D-loop complex with C4 symmetry
Method: helical / : Noji M, Sugita Y, Suzuki Y

EMDB-60622:
Tubular PuuE D-loop complex with C5 symmetry
Method: helical / : Noji M, Sugita Y, Suzuki Y

EMDB-60623:
Tubular PuuE D-loop complex with C6 symmetry
Method: helical / : Noji M, Sugita Y, Suzuki Y

EMDB-52074:
Structure of the Xenorceptide A2-bound E. coli BAM complex (BamABCDE)
Method: single particle / : Jakob RP, Modaresi SM, Maier T, Hiller S

EMDB-35535:
Human ornithine transcarbamylase expressed using mRNA lipid nanoparticles in human cells and PEGylated
Method: single particle / : Kondo K, Yamazaki K, Kubara K, Ishii S, Suzuki Y, Miyazaki T, Mitsuhashi K, Ito M, Tsukahara K

EMDB-33643:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab816
Method: single particle / : Uchikubo T, Shirouzu M

EMDB-33644:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab803
Method: single particle / : Uchikubo T, Shirouzu M

PDB-7y6l:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab816
Method: single particle / : Uchikubo T, Shirouzu M

PDB-7y6n:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab803
Method: single particle / : Uchikubo T, Shirouzu M

EMDB-33065:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab765
Method: single particle / : Kamada K, Shirouzu M

EMDB-33066:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab712
Method: single particle / : Kamada K, Shirouzu M

EMDB-33067:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab709
Method: single particle / : Kamada K, Shirouzu M

EMDB-33068:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab847
Method: single particle / : Kamada K, Shirouzu M

PDB-7x93:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab765
Method: single particle / : Kamada K, Shirouzu M

PDB-7x94:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab712
Method: single particle / : Kamada K, Shirouzu M

PDB-7x95:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab709
Method: single particle / : Kamada K, Shirouzu M

PDB-7x96:
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab847
Method: single particle / : Kamada K, Shirouzu M

EMDB-33293:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, apo structure with DMSO
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

EMDB-33294:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, the structure complexed with an allosteric inhibitor N4
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

PDB-7xmc:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, apo structure with DMSO
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

PDB-7xmd:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, the structure complexed with an allosteric inhibitor N4
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

EMDB-32078:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J

EMDB-32079:
Cryo-EM structure of the SARS-CoV-2 spike protein (3-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32080:
Cryo-EM structure of the SARS-CoV-2 spike protein (1-up RBD) bound to neutralizing nanobodies P17
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32081:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P17
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

PDB-7vq0:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-2314:
Electron crystallographic studies on IP39 of Euglena gracilis
Method: electron crystallography / : Suzuki H, Ito Y, Yamazaki Y, Mineta K, Uji M, Abe K, Tani K, Fujiyoshi Y, Tsukita S

EMDB-2315:
Electron crystallographic studies on IP39 of Euglena gracilis with Fab
Method: electron crystallography / : Suzuki H, Ito Y, Yamazaki Y, Mineta K, Uji M, Abe K, Tani K, Fujiyoshi Y, Tsukita S

EMDB-5374:
Structural basis for broad detection of genogroup II noroviruses by a monoclonal antibody that binds to a site occluded in the viral particle
Method: single particle / : Hansman GS, Taylor DW, McLellan JS, Smith TJ, Georgiev I, Tame JRH, Park SY, Yamazaki M, Gondaira F, Miki M, Katayama K, Murata K, Kwong PD

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

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  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

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  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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